Perognathus longimembris pacificus (Pacific pocket mouse): 125364981
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Entry
125364981 CDS
T08928
Symbol
Limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125364981 (Limch1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
125364981 (Limch1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
125364981
NCBI-ProteinID:
XP_048220785
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All DBs
Position
16:complement(35045726..35339784)
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AA seq
1511 aa
AA seq
DB search
MACPALDLEALQPLQPEPPPEPAFLEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVRKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDASNRGPVKSLDYS
RKLKNVLVTIYWLGKAANSCTSYNGTTLKLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVRKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFSYPETIEEEGSEVGSPAEEDPVGSLGPAGGLEPAQVSGEEQPPSKATVV
APVPKLDDKDPMEIQKRRRLEQAGIKVMPAAQRFASQNNSSEEKEAVCDIILRKENPFLT
HQAGSESEDEAVCRLPDLEKDDFAARRARMNQTKPMVPLHQLLYGPYRKKDVEKSGGSKN
LSKGISDKQSLEYKRNQGHTEEVKATVTCVIRAREGEAVAEGTRRMPDLHKDDLAQRRIK
SNLGPHREAPSFITLSTITEADLQTWERLQVSGGTREGDVQHTCTGPEPSPEINAETAIR
DDFASRKARAYKKASSPKQKFVHFGPVTEIDQQKWKRLSIGKAGPREDVEAVGHDSETPA
SSSGSPDSAAPSRIKEEQVLSSQNNCSRIVNSGSDDNGKRVLWLAPVPESRDEQVSTWGE
NPKRTEEVTPRQLPQDDKEENEGVSQKDPEMASQVERSAEEHSQPLYGPRTPVSDDAEST
SMFDVRCEEEAAVLPHSRARQEQLQLINTQLREEDDKWQDDLARWKSRRRSASQDLIKKE
EERKKMEKLLAGEYGTSERRKSIKTYKEIVQEKERRERELHEAYKNARSQEEAQGILQQY
IERFTISEAVLERLEMPKILERSHSTEPNLSSFLNDPSPMKYLRQQSLPPPKFTATVETT
IARASVPDTNTAAGSGSPSKAVTPKAVPMLTPKPYSQPRNSQEVLKTFKVDARVSMNGET
VHREEEDKDKEDLTMAPAPSLTKSPVFEGVATMLSCPLEVKQDNYSIEINIKKPNAPQEI
TEMVEETKLNSQEDKNDGGNPGKENTELGASEPQHFTTTVTRCSPTVAFVEFSSNPQLKN
DVPEEEKDQKKPENEMGGKVELVLSHKVAKPKSPEPEATLTFPYLDKMPETNQLHLPNLN
SQVDSPSSEKSPVTTPQFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQDKLKEEWEK
AQKEVEEEERRYYEEERKIIEDTVVPFTMSSSSADQLSTSSSVTEGGGTMNKMDLENCQE
EEKERSQKNAFHEDDNDILLKTGECGALEEEGSLTPGTVAHSANPTSKGVHDDLDAEAGG
PHCGVNPQIAQGPPQHQQISNPPICMSEEMKPKTLPLDKSVNHQIESPGERRKSISGKKL
CSSCGLALGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAMSGTDVRIRNGLLNCNDCYL
RSRSAGQPTTL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccgcgcttgatctggaagctcttcagcccctgcagcccgagccgcccccc
gagcccgccttcctcgaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gataaggattttcggacaggattagaaaatggaatccttctttgtgagttgctgaatgct
ataaaaccaggacttgttagaaagatcaatagattgcctaccccaattgcaggattggac
aatatcatcttattcttgagaggttgcaaagaactcggccttaaagaatctcagctcttc
gacccaagcgacctccaggacgcctccaacagaggcccagtcaagagccttgattatagt
aggaagctgaaaaatgttttagttaccatttactggctgggaaaagctgcaaacagctgt
acttcctataatggaaccacattgaagctaaaggagtttgaaggattgttggctcagatg
cgaaaggagacggatgacattgagagtcccaaacgcagcatccgagacagtggctacatc
gactgctgggattcagagcgcagcgactccctgtccccgcctcgccacggcagggatgac
tccttcgacagcctggactccttcggctcccgctctcggcagaccccttctccagatgta
gtgctcaggggaagcagcgatgggagaggaagcgactcagaatctgacttgcctcatcgg
aagctgccggatgtgaggaaggatgatatgtctgcacgaaggacatcccacggtgagcct
aaatcagcagtgcctttcaaccagtacctcccaaacaagagcaatcagaccgcctatgtc
cctgctcctctgagaaaaaagaaggctgagcgagaggagtaccggaagagctggagcaca
gccacctcccccctcggtggggagaggcccttcagctatcctgaaaccatagaggaggag
ggaagcgaagtggggtctcctgctgaagaagacccggtgggctcgctgggccccgctggt
gggttagaaccagcccaagtcagcggggaggagcagcctccctccaaggccactgtggtg
gctccagttcccaagctggatgacaaagacccaatggaaatccagaagcgcaggcgactg
gagcaagctggaatcaaggtcatgcctgctgcccagcgctttgccagtcaaaacaattca
agtgaagagaaagaagctgtttgtgatattatccttcgcaaggaaaatccttttctgacc
caccaagctggctcagagtcagaagatgaagctgtgtgccgactgcctgaccttgaaaag
gatgactttgctgcaaggagagcaaggatgaaccaaaccaagccaatggtgcctttacac
caactcctctatgggccttatcgaaaaaaagatgttgagaaatcaggtggcagcaaaaac
ttgtcaaagggaatctcagacaagcaaagtctagaatataaaagaaaccagggccacacg
gaagaggtgaaggctacggtgacttgtgtgattcgagctcgggagggtgaagccgtggca
gaggggaccaggaggatgccagacctccataaggatgacctggcccagcggagaattaag
agcaacctgggccctcaccgtgaggctccgagcttcatcaccctctccaccatcacggaa
gctgatttgcagacttgggagagattgcaggtgtcgggaggcacaagggaaggagacgtg
cagcatacctgtacaggccccgagccatccccagaaatcaatgcagaaactgccatccga
gacgattttgccagccgcaaagccagggcctataagaaagcatccagccctaagcagaag
tttgtgcactttgggccagtaacagagatagatcagcagaaatggaagcgactcagcatt
ggcaaggccggacctagggaggatgtagaagctgtcgggcatgacagcgagacgccagct
tcttcttcggggtcccctgactcagcggctccttctagaataaaggaagagcaagtgctt
agctcgcaaaataactgcagcagaatagtgaattctggctccgatgacaatggcaaaaga
gtcttgtggctggctcctgtgccagagtctcgggatgagcaggtctccacttggggtgaa
aacccaaagaggaccgaggaagtcacacccagacagctgccacaagacgacaaagaagag
aatgaaggagtttctcaaaaagatcctgagatggcatcacaagtagaaagatcagcagag
gagcacagccagccactatacggtccgagaactcctgtgtcagatgacgcagagagcacc
agtatgtttgatgtgcggtgtgaggaagaggcagcggtgctaccgcacagcagggctcgc
caggagcagctgcagctgattaacacccagctgagagaggaagatgacaaatggcaagat
gacctggctcgttggaagagccgtagaagaagtgcttcccaagacttaatcaagaaagag
gaagaaagaaaaaagatggagaagttattggctggagagtatggaacgagtgaacggagg
aaaagcatcaagacctacaaagaaattgttcaggaaaaagagcggagggagcgggagctg
cacgaggcgtataagaacgcgaggtcccaggaggaggcgcaggggatccttcagcagtac
atcgagaggttcaccatcagcgaggctgttcttgaacgcttggaaatgccaaaaattctg
gaaagaagccattcaacagagccaaacctatcctccttcctgaacgaccccagccccatg
aaatacctgcggcaacagtcactgcctccccccaagttcactgccacggtagaaaccacc
attgcacgtgccagtgttcctgacaccaacacggcagcaggcagtggatctccaagcaaa
gcggtcacgcccaaagcagtgcccatgctgacgcccaagccttactcccagcccaggaat
tcgcaagaggttctgaagaccttcaaggtcgatgcaagagtcagcatgaatggagagacg
gtccatagagaagaggaggacaaggacaaagaggatctcacaatggcgcctgccccctcc
ttaaccaagtccccagtgtttgaaggggtggccaccatgctcagctgccctctggaggtg
aaacaagacaactacagcatcgagatcaacatcaagaagccaaatgctccacaggaaatc
acagagatggtggaggaaaccaaactgaacagccaagaggacaagaatgatgggggaaac
ccaggaaaagagaacacagagcttggtgcatcagagccacagcattttactacaactgtg
actcgatgtagcccaacagtggcctttgtggagttttcctccaaccctcagctgaaaaat
gatgtgccagaagaagaaaaagaccagaaaaagccagaaaatgaaatgggtggaaaagtg
gagctggtgctgtcacacaaggtggcaaagccaaaatctccagaaccagaagcaaccttg
acgtttccgtatctggataagatgcctgaaaccaaccaactacacttgccaaatcttaat
tctcaagtggattctccgagcagtgaaaagtcacctgtaactacacctcagtttaaattc
tgggcatgggacccagaagaagagcgcagacgacaagaaaaatggcagcaggagcaagaa
cgtctgctccaggagagataccagaaggaacaggacaagctgaaggaagagtgggaaaag
gcccaaaaggaggtggaagaggaagagcgcagatactatgaggaggagcgtaagataatt
gaagacactgtggttccgtttactatgtcttcgagttctgcagaccaactgtctacatcc
tcctctgtaactgaaggcggtgggacaatgaataagatggacttggaaaattgtcaagaa
gaagaaaaagagagaagtcagaagaacgctttccatgaggatgacaatgacatattgctc
aagaccggggagtgcggtgccctggaggaggagggcagcctgactccagggactgtggcc
cactctgcgaaccccacatcaaaaggagtccatgacgacctggatgcagaggctggaggc
ccacactgtggggtgaacccacagatagctcagggcccaccccagcatcagcagatatca
aacccaccaatatgcatgtcagaagagatgaaaccaaaaacccttccactggataaaagc
gtgaaccatcagattgaatctcctggtgaaaggcggaagtcgataagcgggaagaagttg
tgctcttcctgtgggcttgctttaggcaaaggcgcagcaatgatcatcgagaccctcaat
ctctactttcacatccagtgtttcaggtgtggaatttgtaaaggacagcttggtgacgcc
atgagtggcacggatgtgaggattcgaaatggccttctaaactgcaatgactgctacctg
cgatccagaagtgctggccaacctacaacattgtga
DBGET
integrated database retrieval system
