Perognathus longimembris pacificus (Pacific pocket mouse): 125365124
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Entry
125365124 CDS
T08928
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
plop04714
Thermogenesis
plop05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125365124 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125365124 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125365124 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125365124 (Smarcd2)
03036 Chromosome and associated proteins [BR:
plop03036
]
125365124 (Smarcd2)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125365124 (Smarcd2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125365124 (Smarcd2)
PBAF complex
125365124 (Smarcd2)
GBAF(ncBAF) complex
125365124 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125365124
NCBI-ProteinID:
XP_048220940
LinkDB
All DBs
Position
17:complement(44458862..44468552)
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPNPALRGPGPAGGMGAPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPSAGSPFGAAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGIKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKADGDSAGTAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccgtggcgcgggcgggttcccgctgcccccgctgagtcccggcggcggcgcg
gttgctgcggctctgggagcaccgcctcctcccgcgggacccggaatgctgcccaacccg
gcgcttaggggcccggggcctgctggaggcatgggggcccccggggctgccgccttccgt
cccatgggccccgcgggccccgcggcacagtaccagcggcctggcatgtcaccagggagc
cggatgcccatggctggcttgcaggtgggaccctctgctggctccccatttggtgcagct
gctccacttcgacctggcatgccacccaccatgatggacccattccggaaacgtcttctt
gtgccccaggcccagcccccaatgcctgcccagcgccgggggattaagaggaggaagatg
gccgataaggttctacctcagcgtattcgggagctagtcccagagtctcaggcatacatg
gatctcttggcttttgagcggaagctggaccagaccatcgctcgcaagcggatggagatt
caggaagccatcaaaaagcccctaacgcaaaagcgaaagcttcgaatctacatttccaat
acgttcagtcccagcaaggcagatggtgatagtgcaggaactgcaggcacccctggggga
accccagcagcagacaaggtggcttcctgggaactccgagtggagggcaaactgctggac
gaccctagcaaacagaagagaaagttttcttccttctttaagagccttgtcattgagctg
gacaaggaactatatggacctgataaccatctggtagagtggcaccggatgcctaccacc
caggagacagatggctttcaggtgaaacgacctggagacctcaacgtcaagtgcaccctc
ctactcatgttggatcatcagcctcctcagtataaattggaccctcgactggccaggctg
ctgggagtgcacacacagacgagagctgccatcatgcaagccctgtggctctacatcaag
cacaaccagctgcaggatggacacgagcgagagtacatcaattgtaaccgttacttccgc
cagatctttagttgtggccgacttcgtttttctgagattcccatgaagctggctggcttg
ctgcaacatccagatcccattgttatcaaccatgtcattagtgtggaccctaatgaccag
aagaagacggcctgttatgacatcgatgtggaggtagacgacccactgaaggcacagatg
agcaattttctggcctctactaccaaccagcaggagattgcctctcttgatgtcaagatc
catgagaccatcgagtccatcaaccaattgaagacccagagggatttcatgctcagcttt
agcactgacccacaggatttcatccaggaatggctccgttcccagcgtcgtgatctcaag
atcatcactgatgtgattggcaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtggggagacacatctttgccaaggtgcagcagcgaaggcaa
gaactggaacaggtgctgggaattcgcctgacctaa
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integrated database retrieval system
