Perognathus longimembris pacificus (Pacific pocket mouse): 125365126
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Entry
125365126 CDS
T08928
Symbol
Psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050
Proteasome
plop05010
Alzheimer disease
plop05012
Parkinson disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05017
Spinocerebellar ataxia
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125365126 (Psmc5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125365126 (Psmc5)
09164 Neurodegenerative disease
05010 Alzheimer disease
125365126 (Psmc5)
05012 Parkinson disease
125365126 (Psmc5)
05014 Amyotrophic lateral sclerosis
125365126 (Psmc5)
05016 Huntington disease
125365126 (Psmc5)
05017 Spinocerebellar ataxia
125365126 (Psmc5)
05020 Prion disease
125365126 (Psmc5)
05022 Pathways of neurodegeneration - multiple diseases
125365126 (Psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
plop03051
]
125365126 (Psmc5)
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
125365126 (Psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
AAA_17
PhoH
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
DUF5906
RNA_helicase
ABC_tran
Zeta_toxin
AAA_11
AAA_19
TsaE
HR1
Prominin
Motif
Other DBs
NCBI-GeneID:
125365126
NCBI-ProteinID:
XP_048220942
LinkDB
All DBs
Position
17:44454050..44459918
Genome browser
AA seq
406 aa
AA seq
DB search
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacgggccggagcagatggagttggaagaggggaaggcaggcagcggactc
cgccaatattatctgtccaagattgaagaactccagctgattgtgaatgataaaagccaa
aacctccggcggctacaagcacagaggaatgagctaaatgccaaagttcgcttactgcgg
gaggagctgcagctgttgcaggaacagggctcctacgtgggggaagtagtccgggccatg
gataagaagaaagttttagtcaaggtacatcccgagggcaagtttgtcgtagatgtggac
aagaacatagacatcaatgatgtgacacccaattgccgggtggctttaagaaatgacagc
tacactttgcacaagatcctacccaataaggtggacccccttgtgtcactgatgatggtg
gagaaggtgccagactcgacttacgagatgattggcgggctggacaagcagatcaaggaa
atcaaagaagtgatcgagctgcctgtaaagcaccctgagctctttgaggctctgggcatt
gcacagcccaagggagtgctgctgtatggacccccaggcactgggaagacattgttggcc
cgggctgtggctcatcatacggactgtacttttattcgtgtctctggctctgaattggta
cagaaattcattggggaaggggcaagaatggtgagagagctgtttgttatggcacgagaa
catgctccatccatcatcttcatggatgaaatcgattccatcggctcctcccgactggag
gggggctctgggggggacagtgaagtgcagcgcacaatgctggagttgctcaaccagctg
gatggcttcgaggctaccaagaacatcaaggttatcatggctacgaataggattgatatc
ctggactctgccctgcttcgccctggacgaatcgaccggaaaattgagttcccacccccc
aatgaggaggcacggctggacattctgaagatccactctcggaagatgaacctgacccgg
gggatcaacctgagaaaaatcgctgagctgatgccaggggcatcaggggctgaagtgaag
ggtgtgtgcacggaggctggcatgtatgccctgagggaacggcgtgtccatgtcactcag
gaggactttgagatggcagtagccaaggtcatgcagaaggatagtgaaaagaacatgtcc
atcaagaaactatggaagtga
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