Perognathus longimembris pacificus (Pacific pocket mouse): 125365177
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Entry
125365177 CDS
T08928
Symbol
Trim16
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125365177 (Trim16)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125365177 (Trim16)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125365177 (Trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
125365177
NCBI-ProteinID:
XP_048221041
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All DBs
Position
17:complement(12091958..12112539)
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AA seq
557 aa
AA seq
DB search
MAELDLMAPGPLPTITTHPLAPVSSDSGSASSAEEDVGFLGRPVEKIEGQGNEQADQGGS
NGKGEDEIPCDFCLGAKRVRAVKSCLTCMVNYCEEHLRPHQENSKLHSHQLTEPAKDQDL
RTCPAHHNPLVAFCCTDRQCICQECGQDEHKGHTLVSLEAARRDKEADLRCTQLNLEQKL
KLNENAIARLQANHKSVLVSVSEVKVVAEEQFGELLAAVRKAQADVMLFLEEKEQAALNQ
ANGIKTHLEYRSAEMERSKQELARLAAISNTVLFLEEYSNLKNAEDTAFPSVYIGLKDKL
SGIRRVITDSTIHIIQLLENYKEKLQEFAKEEQYDIRTQVSAVVQRKHRTSKPEPRSREQ
FLEYACDITFDPDTAHRYLRLQEDNRKVTNTTPWEHPYPDLPSRFVYWRQVLSQQSLYLH
RYYYEVEISGAGTYVGLTCKGIDRKGEERNSCISGNNFSWSLQWNGKEFIAWHSDTETPL
KAGPFRRLGIYIDFPGGTLSFYGVEYDAMTLVHKFDCKFSEPVYAAFWLSKKENAIRIVD
LGEEPEKPSRSSVEAAS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttagatctcatggctccagggccactgcccaccatcaccactcatcctctg
gcccctgtcagctcagactcagggtcagccagctcagcagaagaggatgtgggcttcctg
gggaggccagtggagaagattgagggacagggcaatgagcaggcagaccagggaggttcc
aacggcaaaggggaggatgagatcccgtgtgacttctgccttggggccaagagagtgagg
gcagtgaagtcctgtctcacttgcatggtgaattactgtgaggaacatttgcggccacac
caggagaacagcaaactgcacagccaccagctgaccgaaccagccaaggaccaagacctg
cgtacctgccctgcccaccacaacccactggttgccttctgctgcactgaccggcagtgt
atctgtcaggaatgtggccaggatgagcataagggccacactttagtctccttggaggct
gcccgcagggacaaggaagctgaccttcggtgcacccagttaaacttggagcagaaactc
aagttgaatgaaaatgccattgccagactccaagccaaccataagtctgttttggtgtct
gtatcagaagtcaaagtggtggctgaagagcagtttggagaactccttgctgctgtgagg
aaagctcaggccgatgtcatgctcttcttggaggagaaggagcaagctgctctgaaccag
gctaatggcattaaaacccatctggagtacaggagtgcagagatggagagaagcaagcag
gagctggccaggttggcagccatcagcaacactgttctcttcctggaggagtactccaac
cttaagaatgctgaagacactgctttccctagtgtttacattgggctaaaggataagctc
tcaggcatccgcagggtcatcacagactccaccatacacataatccagttgttggagaac
tataaggaaaagcttcaggagtttgccaaagaagaacaatatgacatcagaactcaagta
tctgctgttgttcaacgcaaacatcggacctcaaaacctgaacctagaagcagggaacag
tttctcgaatatgcgtgtgacatcacatttgaccctgacacagcacacagatatctccgg
ctgcaggaggacaaccgcaaagttaccaataccacaccctgggagcatccttacccggac
ctccccagcaggtttgtatattggcgacaggtgctgtctcaacaaagtctgtacctgcat
aggtactattatgaggtggagatctctggggcaggcacctatgttggcttgacctgcaaa
ggcatcgaccggaaaggggaagaacgcaacagttgcatttctggaaacaacttctcctgg
agcctccagtggaatgggaaagagttcatagcctggcacagtgacacagagaccccactc
aaagctggtcctttccggagactcgggatctacattgacttcccaggagggactctttcc
ttctatggtgtagagtatgatgctatgactctggttcacaagtttgactgcaagttttca
gagccagtctatgctgccttctggctttccaagaaagaaaatgctatccggattgtggat
ttgggagaggaacctgagaagccatcacgctcctcagtggaggctgcttcctag
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integrated database retrieval system
