Perognathus longimembris pacificus (Pacific pocket mouse): 125365235
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Entry
125365235 CDS
T08928
Name
(RefSeq) ABC-type organic anion transporter ABCA8-like
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125365235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125365235
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
125365235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
MMR_HSR1
AAA_23
AAA_25
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
125365235
NCBI-ProteinID:
XP_048221137
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All DBs
Position
17:complement(47741770..47796284)
Genome browser
AA seq
1622 aa
AA seq
DB search
MGKREISVCQQTWALLHKNILKKWRMKRETLMEWINALLLLLLLYLYPIDHQVNDFSSLN
STDLGRVDSFSEPKFTIAYAPLTNTTQQIMKKVASASFMTGREVFGLPDEESIKEVTANY
HEDIARVLFTDTYSYHLKFLLGKGIPIRKEHRDHTAHCVEINGDIDCQLSIFWKEGFVAL
QAAINAAIIEVTTNHSVMEELMSATGKFMTVHPFIGQGGVTTDFFILFCIVAFSPFSYYA
SVNVTRERKKIKGLMKMMGLRDLAFWLSWGLLYAAFIFIMALCLALVIKSIQFFVLTNFM
VVFTLFLLYGLSMVALAFLMSVLVKKSFLTGQLVFLFTVFWGSLGFTALYRYLPASVEWI
LSVFSPFAFVLGITQLLHLDYDLNSNALPDTSSGSNLIIATNFMLAFDTFLYLVLTMYFE
KILPNEYGHRYSPLFFLKSSFWSGEPKPNHVTLEDVADSDSTLNDSFEPLPPEFHGKEAI
RIRNVTKEYKGKPDKIEALKDLTLDIYKGQITAILGHSGAGKSTLLNVLSGLSVPTKGSV
TIYNKELSDAAELDSIIKMAGVCPQCNVQFDFLTVRENLRLFAKIRGIQPQEVDKEVHRV
LLELEMQNIKDVLAQNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNLLK
ERKANRVILFSTQFMDEADLLADRKVFLSKGKLKCAGSSLFLKKKWGIGYHLSLQLKEIC
ARENITSLIKQHIPDAKLSAESEGKLVYTLPLETTYRFPELYKDLDNCPGLGIENYGVSM
STLNEVFLKLEGKSTVDELDTDVFGEVQVERAGDTERLVEMEHILSSLRDMKRLTSGVAL
WANQICAIAKVRLLKLKHEKKALLSLLLILAAGFCPLLLEYILVKIYENSYSWELSPHLY
FHAPGQPPQAPLTHLLIINKTGASIDDFLHSVEQQNIAMEVDRAGTGNGLDDPSYNGAII
VSGDEKDYRFSLACNTKRLNCFPVLMDIVSNGLLGMFAPSARIQTDRSTFLGNIQMNPFE
YMGPTIFWLILASSCPPYIAMSSINDYKSKAWSQLRISGLFPSAYWFGQACVDVPLYCFI
FIFMYLMDFALSFQETLFTVVNRIIHIPCAIGYALSLIFFTYVISFIFRKGRKNSGIWSF
CFFVITMFSVVGFVFQNYDTITLYCITFLIPPATLIGCLFISLELFMFSIFNEGARSTHP
FLVLLIPFLHFFVFLFILRCLEWKFGKKSMRKDPFFRISPRSSNVFQNPEQPEGEDEDVQ
MERMRTAQALSSTNSDEKPVIVANCLRKEYLGKRKHCFSKRKNKIATRNVSFCVRKGEIL
GLLGHNGAGKSTSIKVITGDMKPTAGQVLLKGSSEGDTLGFLGYCPQENVLWPSLTVREH
LELFAAVTGLSKGDKEAAITRLVDALKLQEHLQAPAKALAEGVKRKLCFVLSILGNPSVL
LLDEPSTGMDPEGQQLMWQAIRATIRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCI
GSIQHLKSKFGKDYLLEMKVKTPSQAEPLHEEILRLFPQAARQDRYSSLMVYKLPVEDVK
PLAQAFFKLEKVKQNFDLEDYSLSQSTLEQVFLELSKDQELDGFDEELDLSVKWKLLPQE
DP
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagagagagataagcgtgtgtcagcaaacgtgggcattgttacacaagaacatc
cttaaaaaatggagaatgaaaagagagaccttaatggaatggataaatgctctgctcctc
ctgcttttgttgtacttatatcctatcgatcatcaagtcaatgatttttcttccctgaat
tctacggacttgggaagagtagattcatttagtgaacccaaatttacaattgcatacgct
cctctgaccaatacgacccaacaaataatgaagaaagttgcctctgcctcgttcatgaca
ggcagagaagttttcggactgcctgatgaagaaagcattaaagaagtaacagcaaattac
cacgaggatatagcaagagtccttttcactgatacatactcatatcatctgaaattcttg
ttgggaaaaggaatcccaataaggaaagaacacagggaccacacagctcattgtgttgaa
ataaatggagatattgactgtcaactttcaatattctggaaggaaggttttgtggctctt
caagctgccattaatgctgctattattgaagtcacaaccaatcattctgtgatggaggaa
ctgatgtcagccactgggaaattcatgacggtgcatcccttcatcggtcaaggaggagtg
acaactgatttcttcatcctcttctgcatcgtcgccttctccccattcagttattatgca
tctgtcaatgtgacaagagagaggaaaaagataaagggtttgatgaaaatgatgggtctt
cgagatttggccttctggctgtcctggggtttgctctacgctgctttcatcttcattatg
gccctttgcttggcacttgtgataaaatctatccagttttttgtcctcaccaacttcatg
gtagtcttcaccctctttcttctttatggattgtcgatggtagcgctggctttcttaatg
agtgtcttggtaaagaagtcattcctcaccggccagctcgtgttccttttcacagtcttc
tgggggagcctggggttcaccgcattgtacagataccttcctgcatccgtggagtggatt
ctaagtgtttttagtccctttgccttcgtgcttggcatcacccagcttttacacttggac
tatgatttgaattctaatgcacttcctgacacctcaagcggctcaaatctcatcatagcc
acaaacttcatgttggcatttgatacattcctctatctggtattgacaatgtactttgaa
aagattttgccaaacgaatatgggcatcgatattcacccttgtttttcctgaagtcttca
ttttggtcaggagaaccaaagcctaatcacgtgacactggaagatgtggcagattcagat
tccaccctgaatgactcttttgagccactccctccagaattccatgggaaagaggccatc
agaatcagaaatgttaccaaagaatataaagggaaacctgacaaaatagaagctctgaaa
gacctgacactggacatatacaaagggcagatcactgccatccttggtcacagtggagct
gggaagtcaacattgctcaatgtgctcagtgggctgtctgttcccacaaaaggttccgtc
accatctataacaaggaactctcagatgcagctgagctggacagcatcatcaagatggcc
ggggtgtgcccccagtgcaatgtgcagtttgacttccttactgtgcgagagaacctcagg
ctctttgctaaaattagagggattcagccacaagaagtagataaagaggtacacagagta
ttgctggaattggaaatgcaaaatatcaaggatgtccttgctcagaatttgagtggaggg
cagaagagaaagctgaccttcgggattgccatattaggagacccacagattttcctgttg
gatgaacccactgcagggctggatcccttctcaaggcaccgagtctggaatctgctgaag
gaacggaaagcgaatcgagtgatcctcttcagtacccagttcatggacgaggctgacctc
ctggctgataggaaagtattcctctcgaaagggaagctgaagtgtgcgggatcttctttg
tttttgaagaagaagtgggggattggatatcacttaagtttgcagttgaaggaaatatgt
gctcgggaaaacattacgtctcttattaaacagcacatccctgatgccaagttatcagca
gaaagtgaagggaaactggtctacacgttacccttagaaaccacctataggtttccagaa
ctgtacaaggatcttgacaactgtcctggcctgggaattgagaattacggtgtgtccatg
tcaactctgaatgaggtgttcctgaagctagaaggaaaatccacagttgacgaactggat
actgacgtttttggagaagtacaagtggaaagagctggggacacagaaaggcttgtagag
atggaacacattctctcttccctgagggacatgaaaaggttaacaagtggtgtggctctc
tgggcaaatcagatctgtgccattgccaaagttcgcttgctgaagttgaagcatgagaaa
aaagctcttctttccttactactgattctggcagctggattttgccctcttcttttggaa
tatatcttggtaaaaatatatgaaaacagttacagttgggaactttctcctcatttgtac
ttccatgctccgggacaaccaccacaggcacctctcactcacttactgatcatcaacaaa
acaggggcaagcatcgatgacttcctccattctgtggagcagcagaacatcgccatggag
gtggacagagccggaaccggaaatggcctggacgatccatcctacaatggtgctatcata
gtgtcaggcgacgaaaaggattacagattttccttagcatgcaataccaagagattgaat
tgcttcccagttcttatggatattgtgagtaacgggctgcttggcatgtttgctccctca
gcacgtattcagaccgacaggagcacattcttagggaatatacagatgaatccatttgaa
tacatgggacctaccatcttctggctgattttggcatctagttgccctccttacatcgcc
atgagcagcatcaatgattataagagcaaggcttggtcccagcttcggatctcaggcctc
ttcccttccgcttactggttcgggcaggcgtgtgtggatgtccctctgtactgcttcatc
ttcatctttatgtatttaatggacttcgctttaagcttccaggagactctcttcacagtt
gtaaatcgtattattcacatcccgtgtgccattggttacgccctgtctctcatcttcttc
acatacgtgatttcattcattttccgcaagggaagaaaaaatagtggcatttggtcattt
tgcttctttgtcatcaccatgttctctgtggttggatttgtgttccaaaactatgatact
attacactatactgcatcacgtttttaataccaccggccacactgatcggttgtttgttc
atttcacttgagcttttcatgttctccatctttaatgaaggggcaaggagcacacatcca
tttctggtgttgctaattcctttccttcacttttttgtttttctttttattctccgatgt
ctggaatggaagtttggaaagaaatcaatgagaaaggaccccttctttagaatttctccg
agaagcagtaatgtatttcaaaacccagaacagccagaaggggaagatgaagatgttcag
atggagagaatgagaactgcccaggccttgagctctacaaattctgatgagaagccagtt
atcgttgccaactgtctgcgcaaggagtatttggggaagaggaagcattgcttttctaag
aggaagaacaagatagccaccagaaacgtctccttctgtgttcggaaaggtgagatttta
gggttgttaggacacaatggggctggtaaaagcacatccatcaaggtgataactggagac
atgaagccaactgctggccaggtgctgctgaaagggagcagtgaaggggacaccctgggg
ttcctggggtactgtcctcaggagaacgtgctgtggcccagcctgacggtgagggagcac
ctggagttgtttgcagctgtgacggggctgagcaaaggggacaaagaagccgccatcacg
aggctggtggacgcgctcaagctacaggagcacctgcaggcccccgccaaggccttagca
gagggagtgaagagaaagctgtgcttcgtgctgagcatcctgggaaacccgtcggtgctg
cttctggatgagccatccacaggcatggaccccgagggccagcagctaatgtggcaggcg
atccgagccaccattcgaaacacagagaggggcgccctcctgaccacccattacatggcg
gaggccgaggctgtgtgcgatcgtgtggccatcatggtgtctggcaggctgaggtgtatc
ggttccatccagcacctgaaaagcaaatttggcaaagactatctactggagatgaaggtg
aagactccctctcaggccgagcccctccatgaggaaatcttgaggcttttcccccaggct
gctcggcaggacaggtactcttctctgatggtttataaattgccagtagaagatgtgaaa
ccattagcccaggctttcttcaaattagaaaaggttaaacagaactttgatctagaggat
tatagtctctcgcagtccaccctggagcaggtctttctagagctttccaaggaccaggag
ctggatggttttgatgaggaactcgatctctcggtgaaatggaagctcctcccgcaggaa
gatccttaa
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