Perognathus longimembris pacificus (Pacific pocket mouse): 125365260
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Entry
125365260 CDS
T08928
Symbol
Ntn1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
plop04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125365260 (Ntn1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125365260 (Ntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plop00536
]
125365260 (Ntn1)
Glycosaminoglycan binding proteins [BR:
plop00536
]
Heparan sulfate / Heparin
Axon guidance molecules
125365260 (Ntn1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
125365260
NCBI-ProteinID:
XP_048221179
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All DBs
Position
17:complement(11771756..11947980)
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AA seq
604 aa
AA seq
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MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAF
GKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCW
QSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQ
CRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDD
SLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSMEEPEDCDSYCKASK
GKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSR
DIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgccgtgtgggaggcgctggcggcgctggcggccgtggcgtgcctggtgggc
gcggtgcgcggcgggcccgggctcagcatgttcgccggtcaggcggcgcagcccgacccc
tgctcggatgagaacggccacccgcgccgctgcatcccggactttgtcaacgcggccttc
ggcaaggacgtgcgggtgtccagcacctgcggtcggcccccggcgcgctactgcgtggtg
agcgagcgtggcgaggagcggctgcgttcgtgccacctctgcaacgcctcggaccccaag
aaggcgcatccgcccgccttcctcaccgacctcaacaacccgcacaacctgacgtgctgg
cagtcggagaactacctgcagttcccgcacaacgtcacgctcacgctgtcgctcggcaag
aagtttgaggtgacctacgtgagcctgcagttctgctcgccacggcccgagtccatggcc
atttacaagtccatggactacgggcgcacgtgggtgcccttccagttctactccacgcag
tgccgcaagatgtacaaccggccgcaccgcgcgcccatcaccaagcagaacgagcaggag
gccgtgtgcaccgactctcacaccgacatgcgcccgctgtcgggcggcctgatcgccttc
agcacgctggacgggcggccctcggcgcacgacttcgacaactcgcccgtgctacaagac
tgggtcacggccaccgacattcgcgtggccttcagccgcctgcacacgttcggcgacgag
aacgaggacgactcggagctggcgcgcgactcttacttctacgcggtgtccgacctgcag
gtgggcggacgctgcaaatgcaacggccacgcggcgcgctgcgtgcgcgaccgggacgac
agcctggtgtgcgactgcaggcacaacaccgccggcccggagtgcgaccgctgcaagccc
ttccactacgaccggccctggcagcgcgccacggcgcgcgaggccaacgagtgcgtggcc
tgtaactgcaacctgcacgcccgccgctgccgcttcaacatggagctgtacaagctctca
gggcgcaagagcgggggtgtctgcctcaactgccgccacaacacggctggccgccactgc
cactattgcaaggagggcttctaccgtgatatgggcaagccgatcactcaccggaaggcc
tgcaaagcctgtgattgtcatcccgtgggtgctgctggcaagacttgcaaccaaaccact
ggccagtgtccctgcaaggacggcgtgactggcatcacctgcaaccgctgtgccaaaggc
taccagcagagccgctctcccatcgccccctgcatcaagatccctgtagcgccacctact
actgcagccagcagcatggaggaaccagaagactgtgattcttactgcaaggcctccaaa
gggaagctgaagatcaacatgaaaaagtactgcaagaaggactatgccgtccagatccac
atcctgaaggcggacaaggcaggggactggtggaagttcaccgtgaacatcatctccgtg
tacaagcagggcacgagccgcatccgccgcggtgaccagagtctgtggatacgctcacga
gacattgcctgcaagtgccccaaaatcaagcccctcaagaagtacctgctgctgggcaac
gccgaggactcgcccgaccagagcggcatcgtggccgacaagagcagcctggtgatccag
tggcgggacacgtgggcgcggcggctgcgcaagttccagcagcgggagaagaagggcaag
tgcaagaaggcctag
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