Perognathus longimembris pacificus (Pacific pocket mouse): 125365274
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Entry
125365274 CDS
T08928
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125365274 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125365274 (Rnf43)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125365274 (Rnf43)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125365274 (Rnf43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
DUF4381
zf-ANAPC11
zf-C3H2C3
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
125365274
NCBI-ProteinID:
XP_048221205
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All DBs
Position
17:28179096..28260282
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AA seq
783 aa
AA seq
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MSGGHQLQLAALWPWLLMATLQAGFGHTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVIILASVLRIRCRPRRSRPDPLQQRTAWAI
SQLATRRYRASCRRARAEQTDSVSSCSSAPMCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIIEGDSFSQALGPSHSYQEPGRRLHLIRQHPGHAHYHLPSAYLLG
PPRNSGVRPPRPRPFLPSQEPSTGPRHQRLSRVPHLRAPVEQSHLAMTQHPYAQSWGLSR
LRCPSQHPTACPAPLRRTRPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCGPEVDLPEKGSHPTVASRPRSLDSVVPTG
ETQISSHIHYHRHRHHHYKKRFQWHGRKPAPEMGVPQSRPVSQAQIQPEPPLSHQQVSRP
NLASPSRQLPNPPRPRALTEPAPGAAEAAGPGSPPPGSLCNLQKSSLPVRHPQRKRQSGP
SEPRPASRPQDLTVRPVCQISPPYSPSLAYPWPPEAHPLIFRPPGMDRKLLPEAPDPCFS
SSQPVWLCLTSRRPLGPQRPGEGPSEWSFDTPEGRPCPYPHCQVLPAQPGSEEELEELCE
QAV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacacacaggactagtactggcagcagccgtggagtctgagcga
tcagcagagcagaaggctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcacgctggaaggggtgtttgctggtgttgcggaagtaactccagcagaagga
aaattaatgcagtcccatcctctgtacctgtgtaatgccagtgatgacgacaacctggag
cctggattcatcagcatcgtcaagctggagagtcctcgacgggcccctcgcccctgcctg
tcattggccagcaaggcccggatggcgggtgagcgaggagccagtgccgtcctctttgac
atcactgaggatcgagctgccgctgagcagttgcaacagcccctggggctgacctggcca
gtggtgctgatctggggtaatgatgctgagaagctgatggagttcgtgtacaagaaccgg
aaggcccatgtgaggattgaactgaaggagcctccggcctggccagattatgatgtgtgg
atactcctgacagtggtgggcaccatctttgtgatcatcctggcttcagtgctgcggatc
aggtgccgcccccgccgtagcaggccggaccctcttcagcagcgaacagcctgggccatc
agccagctggccaccaggaggtaccgggccagctgcagaagggctcgggctgagcagaca
gactcagtcagtagctgcagctccgcccccatgtgtgccatctgcctggaggaattctct
gaggggcaggagctccgggtcatttcctgccttcatgaattccatcgtacctgtgtggac
ccctggctacatcagcatcggacctgtcccctctgcatgttcaacattatagagggagac
tccttctcccaggccctgggaccgtctcactcttatcaggaaccaggccggagactgcat
ctcattcgccagcatccaggccatgctcattaccacctcccttctgcctacttgttgggc
cctcctcggaattcaggggtccggcccccacgacctagacccttcttaccatcccaggag
ccaagcacaggccctcggcaccagcgcctctccagagtgccccatctccgggctcctgtg
gagcagtcacacctggcaatgacccagcacccctatgcacagagctggggcctgagccgg
ctgcggtgcccttctcagcaccccacagcttgcccggcacccctgcgccggaccaggcct
catgacagcagcgggtctggagaaagctactgcacagaacgcagtggctacctggccgat
gggccagccagtgactccagctctgggccctgccatggttcctccagtgactctgtggtc
aactgcacggacatcagcctgcagggcatccatggcagcagctccaccttccgcagctcc
ctgagcagcgactttgaccccttggtgtactgtggccctgaagtggatctgccagagaag
gggagccacccaactgtggcctctcgaccccgttctctggactcagtggtgcccacagga
gaaactcagatttccagccatatccactaccacaggcaccggcatcatcactacaagaag
aggttccagtggcatggcaggaagcctgcaccagaaatgggggttccccagtctaggcct
gtttctcaggcacagatacagcctgagccacctttgtcccatcaacaagtcagcagaccc
aacctagcatccccatcaagacagctccccaacccaccacgacccagagcccttacagag
cccgcacctggagccgcggaagctgctgggcctggcagccccccgcctggcagcctttgc
aacctgcagaaatctagcctccccgtgcgacacccacagaggaaacggcaaagtggtccc
tccgagcccaggccagcctctcggccccaggatttaactgtgcgcccagtttgccagatc
tccccaccttacagccccagcttggcatacccttggcccccagaggctcacccactgatc
tttagacctccaggcatggataggaagctgctaccggaagccccagacccctgcttctca
agctcacagccagtgtggttatgtctgacttcacgccggcccctaggaccacagaggcct
ggggaagggccttctgaatggagttttgatactccagagggcaggccgtgcccttaccca
cactgccaggtgctgccagcccaacctggctcagaggaggagctggaggagctgtgtgaa
caggctgtgtga
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