Perognathus longimembris pacificus (Pacific pocket mouse): 125365545
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Entry
125365545 CDS
T08928
Symbol
Chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125365545 (Chad)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125365545 (Chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125365545 (Chad)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125365545 (Chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125365545 (Chad)
Proteoglycans [BR:
plop00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
125365545 (Chad)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
125365545
NCBI-ProteinID:
XP_048221645
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Position
17:33843334..33846620
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AA seq
359 aa
AA seq
DB search
MAHARLFLSLGLLAGLLPMVAACPPKCHCHGDLQHVICDKVGLGKIPKMSEKTKLLNLQR
NHFPVLAINSFKDMPNLVSLHLQHCHIREVVKGAFHGLHQLIYLYLSNNDIRVLRPGAFE
DLTELTYLYLDNNKVNELRPGLLSPLANLFILQLNNNKIRELQPGTFQGAKDLRWLYLSD
NSISSLHPNALDDVENLVKLHLDKNHLSSYPLAPLSKLRVLEELKLSHNHLKNIPSKAFQ
SFGKYLDTLWLDHTHLEKFSDDAFLGVTALKHVHLEYNGLTQLPSSLSFDKMETFSFINN
PWKCTCQLQGLRRWLDSKNVHSDATCDTPINIKGQHIRHTNAFRSCKSPTKRSKKAGRH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgcgaggctgtttctcagcctcggcctcctggccggtctcctgccgatggta
gccgcttgtcccccaaagtgtcactgccacggggacctgcagcatgtcatctgcgacaag
gtggggctggggaagatccccaagatgtcagagaagaccaagctgctcaacctccagcgc
aaccacttccccgtgctggctatcaactcttttaaagacatgccgaacctcgtgtcgctc
cacctgcaacactgccacatccgcgaggtggtcaagggcgccttccacggcctccaccag
ctcatctacctatacctgtccaacaatgacatccgggtgctgcgcccgggtgccttcgag
gacctgaccgagctcacctacctctatctggacaacaacaaggtgaatgagctgcgaccg
gggctcctctcccctctggccaacctcttcatcctacagctcaacaataacaagattcga
gagctgcaacccggcactttccagggtgccaaggatctgcgctggctctacctgtctgat
aattccatcagttctctgcaccccaatgccttagatgatgtggagaacctagtcaagttg
cacctggataagaaccatctctccagctaccccttagcacccctgagcaagctgagggtg
ttggaggaactcaaactatcccacaaccatctgaagaacattccttccaaagccttccag
tcctttggcaaatacctggataccctctggctggaccacacccacctggaaaaattctca
gatgatgccttcctgggtgtgactgcactgaagcatgtccatctggagtacaacggcctg
actcagctgccctccagcctctcttttgataagatggagaccttcagcttcatcaacaac
ccctggaagtgtacctgccagctccagggccttcggcggtggctagattccaagaatgtt
cattcggatgccacctgcgacacacctatcaatattaagggtcagcacatccgtcacaca
aatgccttccgcagctgcaaatctcccaccaagaggtccaagaaagccggacgccattaa
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