Perognathus longimembris pacificus (Pacific pocket mouse): 125365584
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Entry
125365584 CDS
T08928
Symbol
Rnf112
Name
(RefSeq) RING finger protein 112
KO
K25173
E3 ubiquitin-protein ligase RNF112 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125365584 (Rnf112)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125365584 (Rnf112)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125365584 (Rnf112)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
zf-C3HC4_4
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_2
Med9
zf-RING_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125365584
NCBI-ProteinID:
XP_048221714
LinkDB
All DBs
Position
17:13486761..13492884
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AA seq
631 aa
AA seq
DB search
MPRPALSVTSFCHRLGKWERKWSFMGNSSNSWSHVPFPKLELGLGPRPTAPREPPTCSIC
LERLREPISLDCGHDFCIRCFSTHRIPGCELPCCPECRKICKQKKGLRSLGEKMKLLPQR
PLPPALQEVCAVRAERLLLVRINASGGLILRMGAINRCLKHPMARDTPVCLLAVLGEQHS
GKSFLLDHLLRGLPGLESGEGNWPRGEGSLQGCRWGTNGLTRGIWMWSHPFLLGKEGKKV
AVFLVDTGDAMSPELSRETRIKLCALTMMLSSYQILNTSQELKDTDLGYLEMFVHVAEVM
GKHYGMVPIQHLDLLVRDSSHSSKAGQGHVGDILPKLSSKYPKVQELLLGKRARCYLLPA
SRRQWLSKGPGSPGEDAEDDFGQLLRAYVSDVLSTAPQHAKSRCQGYWSEGRTMSRGDRR
LLTGQQLAQEIKNLSGWMGRTGPGFSSPEEMAAQLHDLRKVEAAKKEFEEFVRQQDIATK
RIFSALRVLPDTMRTLLSSQKDAILARHGVTLLCKEREQTLEALEAELQAKAKAFMDSYT
MRFCGHLAAVGGAVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVVGGGV
GAGLAATVGCMEKEEDERVQEGDREPLLQEE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacccgccttgtctgtcacttccttttgtcatcggcttggcaaatgggagaga
aaatggagcttcatgggaaacagcagcaacagttggtcccatgtgccattccccaagctg
gagctgggcctggggccacgtcccacagcaccccgggaaccacccacctgctccatctgt
ctggaaaggcttcgagagcccatctcactggactgtggccatgacttctgcatccggtgc
ttcagcacacatcgcatccccggttgcgagctgccctgctgtcctgagtgccggaagatt
tgcaagcagaagaaaggtctccgtagtctgggggagaagatgaagctccttcctcagcgg
ccactgccccctgcacttcaggaagtctgtgcggtgagggccgaacggctgctgcttgtg
cgaatcaacgcctctggcggtctcatcctcaggatgggagccatcaaccgctgcctgaag
caccccatggccagagacaccccagtatgcctccttgccgtcctcggggaacagcactca
gggaagtccttccttctcgaccacttgctccggggcttgcctggcctggagtctggtgag
ggcaactggcccagaggagaagggtccctacaggggtgtagatggggtactaatgggctc
accaggggcatttggatgtggagccaccctttcctgctggggaaagaagggaagaaggtg
gcggtgttcctggtggacacaggggacgccatgagcccagaactgagcagagagacaagg
atcaagctgtgtgctctcaccatgatgctgagctcctaccaaatcctgaacacgtcccag
gaattgaaggacacagacctgggctatctggagatgtttgttcatgtggctgaggtgatg
ggcaagcattatgggatggtgccaatccagcacctggacctcttagttcgtgactcatcc
cactctagcaaagcagggcaggggcacgtgggtgacatcctcccgaagttgtccagcaag
taccccaaggtccaggagctgctcctagggaaacgagcccgctgctacctgctgcctgct
tcccggaggcagtggctgagcaaaggcccaggaagcccaggagaggatgcagaagatgat
tttggtcaacttctccgggcttatgtgtcagatgtgctgagcacagccccccagcatgct
aagagccgctgccaggggtactggagtgagggacgcaccatgtccagaggggacagacgc
ctgcttacagggcagcagctagctcaggagatcaagaatctgtcaggctggatggggagg
acagggcctggtttcagctctccagaggagatggccgctcagctgcacgacctgaggaaa
gtggaagccgccaagaaagagtttgaggagtttgtgagacagcaggacatagccaccaag
cgcatcttctctgcacttcgggtcctgcccgacaccatgaggaccctcctgtcctcccag
aaggatgccatcttggcccgccatggtgtgaccttgctgtgcaaggagcgagagcagacc
ttggaggccctggaggccgagctgcaggccaaggccaaggccttcatggactcctacact
atgcgtttctgtggccacctggcggccgtggggggcgctgtgggggctgggctcatgggc
ctggctgggggtgtggtgggggctgggatggcagcagctgcactagctgctgaggctggg
atggtggcagctggggcagcagtgggggccactggggctgctgtggtggggggtggtgtg
ggcgctggtctggctgccacggttggatgcatggagaaggaggaggatgagagggtgcag
gaaggggacagagaaccccttctccaggaagaataa
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integrated database retrieval system
