Perognathus longimembris pacificus (Pacific pocket mouse): 125365642
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Entry
125365642 CDS
T08928
Symbol
Trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04064
NF-kappa B signaling pathway
plop04622
RIG-I-like receptor signaling pathway
plop05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125365642 (Trim25)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125365642 (Trim25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125365642 (Trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125365642 (Trim25)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125365642 (Trim25)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125365642 (Trim25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
TRIM_CC
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
BOS1_GOSR2_MEM11-like_N
zf-B_box
ANCHR-like_BBOX
Prok-RING_4
C5HCH
LAMB1
Motif
Other DBs
NCBI-GeneID:
125365642
NCBI-ProteinID:
XP_048221799
LinkDB
All DBs
Position
17:29386919..29403269
Genome browser
AA seq
633 aa
AA seq
DB search
MAELFPLAEELSCSICLEPFREPVTTPCGHNFCRSCLDETWSVLGAPFRCPQCRAVYAAR
PQLQKNTVLCFVVEQFLQVEQGRAPAAPADWTPPVRAPPPSPAGQVACDHCLKEAAVKTC
LVCMASFCQEHLRPHLDSPAFQDHPLQLPVRDLLRRKCPQHNRLREFFCPEHGECICHIC
IVEHKTCSPAPLSQASADLENKLRHKLTIMYSHINGASKALEDVRAKQQGVREAANRKVE
QLRQEFLEMKALIDASEASSTRKIKEEEMRVSTKYESIYQILLKKRSEIQNLKADIEQSL
AKGDEYEFLEKAAKLQGVSSKPVYIPKVEMDHELMKRVYQSTLELKNELKRTLRQLQEKP
EEPSSSGDSGDCGTEPTSKPSRPMKKNPQEKKSKKTSPGCTPPPTVKLPTFGAPGQSVDS
KPTVSDAKASTAQPGSASVKDKVLTIFLTKSKPELQEYSVRIILDYNTAHNKVALTENYT
TASVADVPQNYRPHPQRFTYCSQVLGLHCYKKGIHYWEVELGRNNFCGVGICYGSMDRQG
PESRLGRNSKSWCVEWFNNKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVLFFAVPDKV
YLLYKFKVDITEALYPAFWVFSAGTSLSICSSK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctgttcccgctggccgaagagctgtcgtgctccatctgcttggagcccttc
agggagccggtcaccaccccgtgcggccacaacttctgccgctcgtgcctggatgagacg
tggtcggtgctgggcgcgccattccgctgcccgcagtgccgcgccgtctacgcggcgcgc
ccgcagctgcagaagaacactgtgctgtgcttcgtggtggagcagttcctgcaggtcgag
cagggccgcgcccccgccgcccccgccgactggacgccgcccgtgcgcgccccgccgccc
agccccgccggccaggtggcctgcgaccactgcctgaaggaggcggccgtgaaaacctgc
ctcgtgtgcatggcctccttctgccaggagcacctgcgcccgcacctcgacagccccgcc
ttccaggaccaccccctgcagctgccggtgcgagacctcctgcgacgcaaatgtccccag
cacaaccggctgcgggagttcttttgccccgagcacggcgagtgtatctgtcacatctgc
atagtggagcacaagacctgctctccggctcccctgagccaggccagtgcagacctggag
aacaaactgaggcataaactaaccatcatgtacagtcacatcaacggggcatcgaaagcg
ctggaggacgtgagagccaagcagcagggtgtgcgggaggctgccaacaggaaggtggag
cagctgagacaagaattcctggaaatgaaggcgctcatcgacgcctcagaggccagctcc
acacgcaagataaaggaggaggagatgagagtcagcaccaaatacgagagcatttatcag
atcctgctcaagaagaggagcgagatccagaacctgaaggcggacatcgagcagagcctg
gccaagggggacgagtatgagtttctggagaaagcagcaaaactgcaaggcgtctcatca
aagccagtctatatccccaaagtggagatggatcatgagctcatgaagagggtctaccag
agcaccctggagctcaagaacgagctgaagcggacccttagacagctccaggagaagccc
gaggagccatccagctcaggtgactcaggagactgtggcacagagcctacaagcaaaccc
tcacgccccatgaagaagaaccctcaagaaaagaagtccaagaaaacttcccctggctgt
acccctcccccaactgtcaaactacctacctttggagctcctggacagtcagtggattcg
aaaccaactgtctcagatgccaaagctagcactgcacagcccggttccgcgtctgttaaa
gacaaggtgctaaccatcttcttaaccaagtccaaacccgagctgcaggagtattctgtt
agaattatcctggactacaacactgcccacaacaaggtggcattgacagagaactatacc
accgcgtcagtggctgatgtgcctcagaactaccggccacatcctcagaggttcacctac
tgctctcaggtgctgggcctgcactgctacaagaaagggattcactactgggaggtggaa
ctgggaaggaacaacttctgtggggtaggcatctgctatggcagcatggatcggcagggc
cccgagagccggctcggccgcaacagcaagtcctggtgtgtagagtggttcaacaacaag
atctccgcctggcacaataatgtggagaaaacactgccctctaccaaagccacaagggtg
ggtgtgcttctcaactgtgaccacggctttgtccttttctttgctgttcccgacaaggtc
tacctgttgtacaaattcaaggtggacatcacagaagctctgtatcccgccttctgggtg
ttctctgcaggcacatcactctctatctgctcctccaagtag
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