Perognathus longimembris pacificus (Pacific pocket mouse): 125365645
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Entry
125365645 CDS
T08928
Symbol
Slc38a1
Name
(RefSeq) sodium-coupled neutral amino acid transporter 1
KO
K14990
solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04724
Glutamatergic synapse
plop04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
125365645 (Slc38a1)
04727 GABAergic synapse
125365645 (Slc38a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125365645 (Slc38a1)
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC38: System A and System N sodium-coupled neutral amino acid transporter
125365645 (Slc38a1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Cation_ATPase_C
DUF3730
Motif
Other DBs
NCBI-GeneID:
125365645
NCBI-ProteinID:
XP_048221807
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All DBs
Position
1:56925289..57009861
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AA seq
482 aa
AA seq
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MMHFKSGLELTELQNMTVPEDDNVSNDSNDFTEVENGQINSKFISDRESRRSLTNSHLEK
KKCDEYIPGTTSLGMSVFNLSNAIMGSGILGLAFALANTGILLFLILLVSVTLLSIYSIN
LLLICSKETGCMVYEKLGEQVFGTTGKFVIFGATSLQNTGAMLSYLFIVKNELPSAIKFL
MGKEEEFPAWYVDGRVLVVAVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKK
FQIPCITAALNATSLNSTNSDMCTPKYVTFNSKTVYALPTIAFAFVCHPSVLPIYSELKD
RSQKKMQMVANISFFAMFLMYFLTAIFGYLTFYGAVQSDLLHKYQSRDNDILILTVRLAV
IVAVILTVPVLFFTVRSSLFELAKKTKFNLCRHVLVTFFLLVIINLLVIFIPSMKDIFGV
VGVTSANMLIFILPSSLYLKITNQDGDKGTQRIWAALFLGLGVLFSLVSIPLVIYDWACS
SG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatttcaaaagtggacttgagttaactgagttacaaaacatgactgtaccagaa
gatgataatgttagcaatgattccaatgatttcactgaagtagaaaatggtcagataaat
agcaagtttatttctgatcgggaaagtagaagaagtctcacaaacagccatttggaaaaa
aagaaatgtgatgaatatattccaggaacaacctccttaggaatgtctgtttttaaccta
agcaatgccattatgggcagtgggattctgggacttgcatttgccctggccaatactgga
atccttctttttctgatcctattggtttcggtgacattgctgtctatatattcaataaac
ctcctactgatctgctccaaggaaacaggttgcatggtttatgaaaaactgggtgagcaa
gtctttggtaccacagggaagtttgtgatcttcggagctacatctctccagaacactgga
gcaatgctgagctatctcttcatagtaaaaaatgaacttccttcagccatcaagttcctc
atgggaaaagaagaggaatttccagcctggtatgtggatggacgggtgctggtggtggcg
gtgaccttcggcataattctccctctgtgtctcttgaagaacttaggttatcttggctat
accagtggattttccttgagctgtatggtgtttttcctaatagtggtaatctacaagaaa
tttcaaattccctgcattactgcagccctcaatgcaacaagtcttaattcaacaaacagt
gatatgtgtacaccaaaatacgtcaccttcaattctaagactgtgtatgctttaccaacc
attgcctttgcatttgtatgtcacccctcggtcctgccaatctacagcgagctgaaagat
cgatcacagaaaaaaatgcagatggtggcaaatatctcctttttcgccatgtttctgatg
tacttcttgacggccatttttggatacttgactttctatggagctgtgcagtcagacctc
cttcacaagtaccagagcagagacaacgacattctcatcctgacagtgcggctggctgtc
attgtcgctgttatcctcacagtgccggtgttgtttttcacagttcgttcatccttgttt
gaattggctaagaaaacgaaatttaacttatgtcgccatgtcttggttacatttttcctc
ttggtgatcatcaacttgctggtgatctttatcccctccatgaaggatatctttggagtt
gtaggtgttacctctgctaatatgcttattttcatccttccttcatctctttatttaaaa
atcacaaatcaggatggagataaaggcacacaaagaatttgggctgccctctttttggga
ctgggggtactgttttccttggtcagcattcctctggtcatctacgactgggcctgctcg
tcaggttag
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