Perognathus longimembris pacificus (Pacific pocket mouse): 125365654
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Entry
125365654 CDS
T08928
Symbol
Utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125365654 (Utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125365654 (Utp6)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125365654 (Utp6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
125365654
NCBI-ProteinID:
XP_048221817
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Position
17:complement(21150814..21185704)
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AA seq
572 aa
AA seq
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MAEIIQERIEDRIPELEQLERIGLFSAKEIKAIIKKASDLEYKIQRRALFKEDFINYVQY
EINLLELIQRRRARIRYSFKKDEIEHSIVQRIYGVFGRASAKWKDDVQLWLSYVVFCKKW
GTKAQLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECQKLYQ
EYFRMELMHAEKLRKEKQEFEKAALDMGDFDQPEEILRGELARIIYKTSVSKIKGAEFHV
SLLSIARLFDFAKDLQKEIYDDLQALHTDDPLTWDYVARQELEITSNSEEQPTTKQAKAV
ELDQREERCCAVYEEAVKTLPTEAMWKCYINFCLERFSKKTSSSFLRGKRLKRTMITFKK
AHELKLLSELQYKQWVELLLHQDCRQALEVAEAGTELFKDSVTMWQLRLQVLIDSKSPDI
AVAFEEAFVHLKPQVCLPLWILWVEWSEGAKSEEDTEAIFKKALLAVTGASSVTLKNKYL
DWAYQSGGYKKARAVFKSLQERRPFSVDFFRKMMQFEKEQESCSMANLRDYYERALREFG
STDSDLWMDYIKEELNHPLVELRTVDRSIGEP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcggagataatccaggaacgcatagaagaccgtatccccgaattggaacagctggag
cgcattggacttttcagcgctaaggaaattaaggccatcattaagaaggcttctgatcta
gaatacaaaatacagagaagagcccttttcaaagaagactttatcaattatgtccaatat
gaaattaatcttttggagctgatccagcgaagaagagcacgcatcagatattcatttaag
aaggatgagattgaacattcaattgtacaacggatatatggggtctttgggcgtgcttca
gcaaagtggaaagatgatgtgcaactttggctgtcctatgtagttttttgtaagaaatgg
ggtaccaaagctcaacttagcaagatattctctgccatgttggccattcattcaaacaag
ccagctttgtggattatggcagccaaatgggaaatggaagatcgcttgtcttctgaaagt
gcaagacagctctttcttcgcgctctgcgctttcatcctgagtgccagaaactctatcag
gaatactttagaatggagctgatgcatgctgagaaactgagaaaggaaaagcaagaattt
gaaaaggctgccttggacatgggggattttgatcagcctgaagaaatccttaggggtgag
ttggcgaggatcatctacaaaacttctgtaagcaagattaaaggggccgaatttcatgtg
tcacttctttccattgcacggctatttgactttgccaaagatctacaaaaagaaatctat
gatgaccttcaggctttgcacacagatgaccctctcacctgggattacgtggcacggcaa
gaattagagatcacatctaattcagaagagcagcccacaacgaaacaagccaaggcagta
gagttggaccagagagaagagaggtgctgtgctgtatatgaagaggcagtgaagactctg
cctacagaggccatgtggaagtgttacatcaacttttgtttagaaagattttctaagaag
acgagtagttcattcctcagagggaagaggctaaaaagaaccatgattacattcaaaaag
gctcatgaactcaagcttctctcagaattgcaatacaagcagtgggttgaattattgctg
caccaagactgtaggcaagctctggaggtggcagaagctgggactgagctgttcaaggac
tctgtgaccatgtggcagttgcggctgcaggtgctgattgactcaaagagccctgacata
gctgtggcttttgaagaagcctttgtgcacctgaaaccacaggtttgtctccccttgtgg
attttatgggtagagtggagtgaaggtgccaaaagtgaagaagacacagaagcaatcttt
aagaaagctcttttagctgtcacaggtgccagctcagtaacactgaagaataaataccta
gattgggcataccagagtggtggctacaaaaaggcccgagctgtgtttaaaagtttacag
gaacgccgtccattttcagtcgacttttttagaaaaatgatgcagtttgaaaaggagcaa
gaatcctgcagtatggcaaatttaagagattattatgagagggctttgagagagtttgga
tctacagattctgatctttggatggattacatcaaagaagaattgaaccaccccttggta
gagctgagaactgtggacagatctattggcgagccatga
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