Perognathus longimembris pacificus (Pacific pocket mouse): 125365673
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Entry
125365673 CDS
T08928
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
plop05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125365673 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125365673 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125365673 (Arid2)
03021 Transcription machinery [BR:
plop03021
]
125365673 (Arid2)
03036 Chromosome and associated proteins [BR:
plop03036
]
125365673 (Arid2)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
ARID
125365673 (Arid2)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125365673 (Arid2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
125365673 (Arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
125365673
NCBI-ProteinID:
XP_048221847
LinkDB
All DBs
Position
1:complement(57198894..57348353)
Genome browser
AA seq
1837 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDTEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSNHQVLSD
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHSVKRVEDSSSIGQAHIHVVGVK
RRAIPLPIQMYYQQQPISTPVVRVDSVPDLSPTPSPAGLPHGSQTVGNHFQRAPVPNQSS
NLTTTQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSIAVGGGPVQSSVVQNHSTGPQPVTVMNSQTLLHHPPVIPQPSSLHTVVP
GQIPSGTPVTVIQQTVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQPSSQQASAGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVPSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPIPATNNQVPTAMPSSSTPQSQGPPPTVSQMLSVKRQQQQQQQHS
PAPPPQQVQVQVQQPPQVQMQVQPQQTNAGVAQPASGESSLIKQLLLPKRGPSTPGGKLI
LPAPQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQPPAQQLLVGQQNVQLVQSGMPSTG
GVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAP
AGITVSGTQAGVGLQVQTLPATQASPAGQSSCTIATPPFKGDKIICQKEEEAKEATGLHV
HERKIEVMENPSCRRGATNTSNGDTKESEVQVGSLLNGKKYSDSSLPPSNSGKTQSEASQ
CSLISNGPSLELGENGASGKQNSEQMDMQDIKSDLKKPLVNGICDFDKGDGSHLSKNIPN
HKTSNHVGNGEISPVESQGTLDDTQQDTAKGDQLERISNGPVLTLAGSPSLSSIQEASGV
AAQQFSGTDLPNGPLTSSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVPHSA
PSSDVRSTNGTAECKTAKRPAEENDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPA
GADPSTVAKVAIESAVQQKQQHPPPYRQSVVPQNTPMPPSPAVQVQGQPSSSQPSPLSAS
SQHAEPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQ
RFSFITHLQDKHCSKDALLAGLKQDESGQAGNQKSSTKPPAVGGTGSTPRAQKAIVNHPS
AALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLS
VLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaagatccctgcggtg
ggtgggaaggagctggatctccacgggctgtacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtat
gaaaaagttcatcattttggggaagatgatgatgaagtaccaccaggcaacccaaagcca
cagcttcctatcggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcggcaaagttatgggctatcaatggactttaattcgccaaatgactataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgcaattaatgtatgc
actctcctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgccggggtatttgatgacactttaggatccttttctactgta
tttggagaagaatggaaagagaagactgatagagattttgttaagttttggaaagacatc
gtagatgatactgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttgtttcatccacctcgaaagctgggcattaatgat
attgaaggacagcgggtgcttcagattgcagtgattctacgaaatctttcctttgaggag
ggaaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctttacggcaattaggccttgacacgttaggaaatattgcagct
gagcttttattggaccctgttgatttcaaaactacacacctgatgtttcatactgtcaca
aaatgtctaatgtcaagggatagatttttaaaaatgaggggcatggaaattttggggaat
ctttgcaaagcagaagataatggtgttttaatttgtgaatatgtggatcaagattcatac
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacactcgag
gtgctatacatgctcactgaaatgggagatgttgcttgcacgaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctcgtttctatggatattcagatgtttggccctgat
gcactagctgcagtaaaactcgttgaacatccaagctccaatcatcaagttttatctgac
attaggccacaagctatagagcaggtccaaacccagactcatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcactttgaagtaaatccagattgttctgtg
tctcgagcagaaatgtattctgaatacctctcaacttgtagtaaattagctcgtggtgga
atccttacatcaactggattttataaatgtcttagaacagtctttccaaatcattcagtg
aagagagtggaggattccagcagcattgggcaggcacatattcatgtggtaggtgtgaaa
cggagggccatcccacttcccatccagatgtactatcagcagcagccaatttctactcca
gttgttcgtgttgattcagttcctgatttatctccaactccttcacctgcaggacttccc
catggatcacaaactgtaggaaatcatttccagcgggctccggttcccaaccaatcttca
aatttgacgacgacacaaatgtcttttccagtacaaggtgttcatactgtggcgcagact
gtttccagaattccaccaaatccttcagttcatacacaccagcagcaaaatgctcccgtg
actgtcattcagaataaagctccaattccttgtgaggttgttaaggcgacagtaatccag
aattctataccccagacagcagttcctgtgagcattgctgtcggaggaggacctgtacag
agttctgtggttcagaaccacagtaccgggccacaaccagttacagttatgaattctcag
acattgcttcaccatccacctgtaattccacaaccatcttcattacacacagtggtgccg
ggacaaattccttcaggtactcctgtcacagtcattcagcaaactgtcccacagagccat
atatttggcagagtacagaacataccagcatgtacgtctacagtttcacaaggtcaacag
ttaatcaccacatcaccacaacctgtgcaaccgtcatctcagcaggcatcagctggtagc
cagccacaagacactgttatcatagcacccccacagtacgtaacaacttctgcatccaat
attgtctctgcaacttccgtacagaattttcaggtagctacagggcaaatggttactatt
gctggtgttcccagtccacaaccatcaagggtaggattccagaacattgcaccaaaaccc
ctcccttcccaacaagttccatccacagtggtccagcagcccattcaacaaccacagcag
ccaacccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcagacgtatgca
ccagccattcaccaaatagttcttgctaacccagcagctttgcccgctggccagacggtt
cagttaactggacaaccaaacataactccctcttcttccccttcacccatcccagctaca
aataaccaagtccctactgccatgccatcttcgtccactcctcagtcgcagggcccacct
cccacagtcagtcaaatgctatctgtgaaaagacagcagcagcagcagcaacagcattca
ccagcaccaccaccccagcaggtccaggtccaagttcagcagccaccacaagtacaaatg
caagttcaacctcagcaaacaaatgctggagttgctcagcctgcttctggtgagtcaagt
ctgataaagcagctgctgcttccaaagcgtggtccttccaccccgggcggtaagctgatc
ctcccagcaccacagattccgccccctaataatgcaagagctcccagccctcaggtggtc
tatcaggtggccaataaccaagcagctggttttggagtacagggccaacctccagctcag
cagctattggttggacagcaaaatgttcagttggtccaaagtggaatgccatccacaggg
ggagtgcagaccgtgcccatttcgaacttacaaatattgccaggcccattgatctccaat
agcccagcaaccattttccaagggacttctggaaaccaggtaacaataacagttgtgcca
aatacgagttttgcaactgcaactgtgagtcagggaaatgcaactcagctcattgctcca
gcaggtattaccgtgagcggaacccaggcaggagttggacttcaggtgcaaacgcttcca
gccactcaagcatctccagctggacaatcatcgtgtaccattgctactcccccattcaaa
ggtgataaaataatttgccaaaaggaggaggaggcaaaggaagcaacaggtttacatgtt
cacgagcgtaaaatcgaagtcatggagaacccatcatgccgacgaggagccacaaacacc
agcaatggggatacaaaagaaagtgaagtgcaggtgggaagtcttttaaatgggaaaaag
tacagtgactcaagtctacctccttcaaactcagggaaaactcaaagtgaggctagtcag
tgctcactaatcagtaatgggccatcactagaactaggtgagaacggagcatctggaaaa
cagaattcggaacaaatggacatgcaggatatcaaaagcgatttgaaaaaaccccttgtt
aatggaatctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaat
cacaaaacttccaatcatgtaggaaatggtgagatctcccccgtggagtcacaaggaact
ttagatgacactcagcaagatactgccaaaggcgatcaactagaaagaatttctaatgga
cctgtattgactttggccggttcaccatctctgagcagtatacaggaagcttcaggtgtg
gccgcacagcaatttagtggtactgatttacctaatggacctctaacttcaagtttgaat
tcagatgtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgtt
atacaggggcatcaaattatagcagttccccactcaggatctagagtgccccattcggcc
ccatcctctgatgtgcggtctactaatggcacagcagaatgcaaaactgcgaagaggcca
gcagaggagaatgatagggaaacagtcacaggaattccaaataaagtaggagtgagaatt
gttacaatcagtgaccccaacaacgccggctgtagtgcaaccatggttgctgtgccagca
ggagcagatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcag
cagcatccgccaccatacagacagagcgtggtcccacagaacactcctatgccaccttca
ccagctgttcaagtgcagggccagcccagcagttcccagccgtctccgctcagtgcatcc
agtcaacatgcagagccaatgaggaaaccgggccagaacttcatgtgcctgtggcaatcc
tgtaaaaagtggtttcagacgccctcacaggttttttaccacgcagctactgaacatgga
ggaaaagacgtgtacccggggcagtgtctttgggaaggctgtgagccttttcagcgacag
cgcttttcttttattacacacttacaggataagcactgctcaaaggatgccctgctcgca
ggattaaaacaagatgaatcaggacaagcaggaaatcaaaaatcttctaccaagccgccg
gctgtagggggcacaggctccacaccaagggcacagaaggccattgtgaaccatcccagt
gccgccctcatggctctccggagaggatccaggaaccttgtctttagagactttacagat
gaaaaagagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaat
attggtaaatactcagaatgtggtcgcagattgttaaagagacatgaaaacaacttgtca
gtgctagccattagtaacatggaagcctcctccacccttgccaaatgcctttatgaactt
aattttacagttcagagtaaagaacaagaaaaagactcggaaatgctgcagtga
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integrated database retrieval system
