Perognathus longimembris pacificus (Pacific pocket mouse): 125365774
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Entry
125365774 CDS
T08928
Symbol
Pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125365774 (Pus7l)
Enzymes [BR:
plop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
125365774 (Pus7l)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125365774 (Pus7l)
Prokaryotic type
125365774 (Pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
DKNYY
Motif
Other DBs
NCBI-GeneID:
125365774
NCBI-ProteinID:
XP_048221967
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All DBs
Position
1:58785788..58802852
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AA seq
696 aa
AA seq
DB search
MEEDADYRVGFSSLYSIHDHLGFQGTIKNSPSDFIVIEIDEQGQLVNKAMDEYFLEVSKI
LPEPKNIAKKPKLDFQTGTFDARSNQEVTGLARFSSGEPNLQSDSRKEDSTSDGTTSTWE
EGKADLLSSFLDEKTNEQLSQFALEIKEQWNLKRESVEASPELSLGRFLEKNQRAALHSV
VRQTFPFLITVGKNSEIVVKPNLDYKELCCLVSEEEALDFFKYLDAKKENSKFTFKPNTN
KDHRKAVHHFVNKKFGNLVETKSFPEENCKSGNNRNVITVRFREKVHRSEKRALLQGQER
KVVYTAFTLRKENLEMFEALGFLAMKLGVIPSDFSYAGLKDKKAVTYQSMVVKKVNPERL
KSVEKEMEKKRMSVFNIRPVNDPLRLGQLKGNHFDIIIRNLQNQTNDSANLRERILEAIE
NVKHKGFVNYYGPQRFGKGRKVHTDQIGLALLKSEMMKAVRLFLTPEDLDDPVNKAKKYF
LQTEDAKGTLSMMPEFKFRERALLESLHRFGMTEEGCTRAWLSFPHSMRIFYVHAYSSKI
WNEAASYRLAIYGCRVVEGDLVCLEEDVNDHFSSSKVHLVTEEEESANTYAMYQVVLPVL
GYNILYPKNKVGQWYQEVLSHNGLQACRFKVPTLKLNVPGCYRQVLKRPHNLTHQLQGDG
DAAVEIEADASLALAFDLDASCYATVCLREIMKHDV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgcagattatagagtcgggtttagtagcctgtattccattcatgatcac
cttggatttcagggtactataaagaactcaccaagtgactttattgttattgagattgat
gaacaggggcagttagtcaataaggctatggatgaatattttctggaagttagtaaaata
ctacctgagccaaaaaatattgccaagaaacctaaacttgattttcaaactggaaccttt
gatgccagaagtaatcaagaagttactggcttggctaggttctcctctggtgagcccaat
cttcagtctgactcaagaaaagaagacagtaccagtgatgggacgacttctacctgggag
gaaggaaaagctgatctattaagctcttttttagatgagaaaactaatgaacaattgagt
cagtttgccctagagataaaagagcagtggaatttgaaaagggagtcagtggaagcctct
ccagaattgtcactgggcagattccttgagaaaaaccaaagggctgccctacacagcgtt
gtcaggcagacgtttcctttcttaatcaccgtcggcaaaaacagtgagattgttgtcaaa
cctaatcttgactataaagaactgtgttgtttggtgtctgaagaggaagcacttgacttt
tttaagtacttggatgcaaagaaagaaaattcgaaattcacatttaaacccaatacaaac
aaagatcatagaaaagctgtgcatcattttgtcaataagaaattcgggaatctggtagaa
accaaatcatttcctgaagagaattgcaagagtgggaataatcgaaatgtaataacagta
agatttcgggagaaggtacacagatctgaaaaaagagctcttcttcaaggccaagaaagg
aaagttgtatatacagcttttaccctacgaaaggaaaacctggagatgtttgaagcactt
ggttttttagccatgaaacttggagtgattccttcggattttagttatgcaggccttaaa
gataagaaagctgtcacgtatcagtcaatggtggttaaaaaagtgaatccagaaaggttg
aaaagtgtagagaaagaaatggaaaagaaaaggatgagcgtttttaacattcgacctgtg
aatgatccccttagacttggtcagctcaaaggaaatcactttgatattatcatcagaaat
ttacaaaatcaaaccaatgattctgcaaacttgagggagagaattttggaggcaatagaa
aatgttaagcataaaggctttgtgaattactatggaccacaaagatttgggaagggaagg
aaagttcacacagaccaaattggattagctttgctgaagagtgaaatgatgaaggcagta
agattatttcttacacctgaagacctggatgatcctgtaaacaaagcaaagaaatatttt
cttcaaactgaggatgcgaagggtacgctgtcaatgatgcccgagttcaaatttcgagaa
agggcactgctggagtcactgcatcgctttggcatgacagaggagggctgcacgcgggcc
tggctctcttttccccactccatgcgcatcttttacgtccatgcctacagcagcaagatt
tggaatgaggctgcatcttacagacttgccatctacggatgcagggtggtggagggcgat
ttggtgtgtttagaggaagatgtgaatgaccatttctccagtagtaaagttcatctggtg
actgaagaagaggaatcagctaatacatatgcaatgtaccaggtggttctgccagttctt
ggatacaacattctatacccaaagaataaagtaggccagtggtaccaggaagtgcttagc
cacaatggacttcaggcatgccgttttaaagtaccaactctcaaactgaatgtaccagga
tgctacagacaggttctgaaacggccccacaacctgacgcaccagctacagggagatggt
gatgctgctgtggagatagaagcagatgcatcccttgcccttgcctttgatctggatgct
tcctgttatgctacagtttgcttgagggagataatgaaacatgatgtttaa
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