Perognathus longimembris pacificus (Pacific pocket mouse): 125365836
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Entry
125365836 CDS
T08928
Symbol
Xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
plop01100
Metabolic pathways
Module
plop_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125365836 (Xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125365836 (Xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125365836 (Xylt2)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
125365836 (Xylt2)
Glycosyltransferases [BR:
plop01003
]
O-Glycan biosynthesis
Glycosaminoglycan
125365836 (Xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
TTC3_DZIP3_dom
Motif
Other DBs
NCBI-GeneID:
125365836
NCBI-ProteinID:
XP_048222043
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Position
17:complement(33912324..33924957)
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AA seq
865 aa
AA seq
DB search
MVASARVQKLVRRYKLAIATALAILLLQGLVVWSFSGLEEDEPGEKGRQRKPRPLDPGEG
SKDTDSSAGRRGSAGRRHGRWRGRAESPGVPVAKVVRAVTTRHRASRRVPPAPPPEAPGR
QNLSGAAAGEALAGAAGFPPHGDTGSVEGAPQPTDNGFTPKCEIVGKDALSALARASTKQ
CQQEIANVVCLHQAGNLMPKAVPRHCQLAGKMSPGIQWEEIRAQQPVEGPPIRIAYMLVV
HGRAIRQLKRLLKAVYHKQHFFYIHVDKRSDYLHREVVELAQQYDNVRVTPWRMVTIWGG
ASLLRMYLRSMRDLLEVPGWAWDFFINLSATDYPTRTNEELVAFLSKNRDKNFLKSHGRD
NSRFIKKQGLDRLFHECDSHMWRLGERQIPTGIVVDGGSDWFVLTRSFVEYVVYTNDPLV
AQLRQFYTYTLLPAESFFHTVLENSPACESLVDNNLRVTNWNRKLGCKCQYKHIVDWCGC
SPNDFKPQDFLRLQQVSRPTFFARKFESTVNQEVLEILDFHLYGSYPPGTPALKAYWENI
YDMADGPSGLSDVMLTAYTAFVRLSLRHVATAAPPQATALCRFEPRGLPSSVHLYFYDDH
FQGYLVTQAVQPSAQGPAETLEMWLMPQGSLKLLGRNDQASRLQSLEVGTEWDPKERLFR
NFGGLLGPLDEPVAMQRWARGPNLTATVVWIDPTYVVATSYDITVDADTEVTQYKPPLSR
PLRPGAWTVRLLQFWEPLGEIRFLVLPLTFNRKLPLRKDDASWLHAGPPHNEYMEQSFQG
LSGILNLPQPEPVEEAARRHKDLTGPALETWTDGELSGFWSVAGLCAIGPSACPSLEPCR
LTSWSSLSPDPKSELGPVKADGRLR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggtggctagcgcgcgggtgcagaagctggtgcggcgctacaagctggcgatcgccacc
gcgctggccatcctgctgcttcagggcctggtggtgtggagcttcagcggcctggaggag
gacgagccgggcgagaaaggaaggcagaggaagccacggccactggaccctggagagggc
tccaaggacacagacagttctgccgggcgccggggcagcgcaggcagaaggcatggacgt
tggcggggccgtgctgagagtccgggtgtacctgttgccaaggtggtacgggcagtgacc
actcggcacagagccagtcggcgagtcccacctgccccacctccagaggccccaggccgc
cagaacctgagtggggcagcagctggggaggctctggcaggggctgctggcttcccacca
catggagatacagggagcgtggagggtgctccccaacccacggacaatggcttcacccct
aagtgtgagattgtgggcaaggatgcactgtctgcactggcccgggccagcaccaagcaa
tgtcagcaggagatcgccaacgtggtgtgcctacaccaggctgggaacctcatgcccaag
gctgtgccccggcactgccagctggctgggaagatgagtcctggcatccagtgggaagag
atccgtgcccagcagcctgtggagggtccccccatacgcatcgcctatatgctggtggtt
catggccgtgccatccgccagctgaagcgcctcctcaaggctgtctaccataagcagcac
ttcttttatatccatgtggacaagcgctccgactatctgcaccgcgaagtcgtagagctg
gcccagcagtacgataacgtgcgggtgacaccttggcgcatggtcaccatctggggtggg
gccagccttctgaggatgtacctgcggagcatgcgagatctactggaggtacccggctgg
gcctgggacttcttcatcaacctcagtgccactgactacccaaccaggaccaatgaggag
ttggtggcattcctatccaagaaccgagacaagaatttcctcaagtcacatggtcgggac
aactcgaggttcatcaagaagcagggcctagaccggctcttccatgagtgtgactcccac
atgtggcgcctgggcgagcggcagatcccaacgggcattgtggtggatggtggctctgac
tggtttgtgctgacacgcagctttgtggagtatgtggtgtacacaaatgatccacttgtg
gcccaactacgccagttctacacgtacacgctgctcccagctgagtccttcttccacacg
gtgctggagaacagcccagcctgtgagagcctcgtggacaacaacctgcgtgtcaccaac
tggaaccgcaagctgggctgcaaatgccaatacaagcacattgtggactggtgtggctgc
tctcccaacgacttcaagccacaggacttcctccggctgcagcaagtctccagacccacc
ttctttgcccggaagtttgagtcaactgtgaaccaggaagtcctggaaatcttggacttc
cacctgtatggcagctacccacctggcacaccagccctcaaggcctactgggagaacatc
tatgacatggccgatggccccagtgggctcagtgatgtcatgctgactgcttataccgcc
tttgtacgcctcagcctacgccatgttgccactgccgcacccccacaggccactgcactc
tgcaggtttgagcccaggggtttgccgtccagtgtgcacctgtatttctatgacgaccat
ttccagggctacctggtgacgcaggcggtgcagccctcagcccaggggccagcagagaca
cttgagatgtggctgatgccccaggggtcgctgaaactgttggggcgcaatgaccaggcc
agccggctccagagtttggaggttggcactgagtgggaccccaaagaacgtcttttccgg
aactttggggggcttctgggaccactggatgagcctgtagcgatgcagcgctgggcacgg
ggccccaacctaacggccacagtggtctggatcgacccgacctatgtagtggccacatca
tatgacatcacggtagatgcagacactgaggtcacacagtacaagccccctctgagtcgg
cccctgcggccaggagcctggaccgtgcgactgcttcagttctgggaacctctgggtgag
atccgcttcctcgtcctgcctttgactttcaaccgaaaactacctctcaggaaagatgat
gctagctggctgcatgcaggaccaccccacaacgagtacatggaacagagtttccagggg
ctgagtggcatcttgaacctgcctcagccagagcccgtggaggaggctgcccggcggcac
aaagacctcacaggtcctgcacttgagacctggacagatggggaactgagtggcttctgg
tctgtggcaggactgtgtgccataggcccctctgcctgcccttccctggagccctgcaga
ttgaccagctggagctctctgtctcctgaccccaaatcagaactggggcctgtcaaagca
gatgggcgactcaggtag
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