Perognathus longimembris pacificus (Pacific pocket mouse): 125365841
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Entry
125365841 CDS
T08928
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125365841 (Supt6h)
03036 Chromosome and associated proteins [BR:
plop03036
]
125365841 (Supt6h)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125365841 (Supt6h)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125365841 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
125365841
NCBI-ProteinID:
XP_048222047
LinkDB
All DBs
Position
17:complement(19497056..19531614)
Genome browser
AA seq
1725 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKLKRGQKYRRV
KKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPSSSFSRKGPSTIQKIKE
ALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAED
EGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLL
NKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTTY
RSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQW
LQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaagctgaggaatctgaggaagaatacaatgatgaagga
gaagtggtacccagagtcaccaagaagtttgtggaagaggaagatgatgatgaggaggaa
gaggaagagaacttagatgatcaagatgagcaaggcaatctgaaaggatttatcaatgat
gacgatgatgaagatgaaggggaggaggagggcagtgattctggtgattcagaagatgat
gttggccacaagaagagaaaacgcacttcttttgatgatcgcctggaggatgatgatttt
gacctcattgaggagaatttgggtgtcaaactcaaacgaggacaaaagtaccgacgagtc
aaaaaaatgtcagatgatgaagatgatgatgaagaggagtatggcaaggaggaacacgaa
aaagaggctattgcagaggaaatcttccaggatggggaaggggaagaaggacaggaggct
gtggaggcccccatggctcctccggaggaagaggaagaagatgatgaagagtcagatatt
gacgacttcattgtggatgatgatgggcagcctctgaaaaaacctaagtggcggaaaaaa
cttcctggatacacagatgcagccctgcaagaagcccaggagatctttggtgtggacttt
gactatgatgaatttgagaaatacaatgagtatgatgaagaactggaggaagagtatgaa
tatgaggatgatgaggctgagggtgaaatccgagtgcgcccaaagaaaaccaccaagaag
cgtgtaagccgcaggagcatctttgagatgtatgagcctagtgagctggaaagcagccat
ctcacagatcaggacaatgagatccgagccactgaccttcctgagaggttccagctccgt
tccatcccagtcaagggggctgaagatgatgaactggaagaagaagctgactggatctac
agaaatgcctttgccacaccaaccatttctttacaggaaagctgtgattacctagaccgg
ggacaaccaagcagcagtttcagtcgcaaagggcctagcaccattcagaagatcaaggag
gccttaggcttcatgcgaaatcagcattttgaggtgccttttattgccttctacagaaag
gagtatgtggagcctgagttacacatcaatgacctatggagggtatggcagtgggatgaa
aagtggactcagctgaggatccgcaaagagaacctaacacggctatttgagaagatgcag
gcttatcagtatgagcaaatatctgctgatcctgacaaacctttggctgatggcatccgg
gccctggacaccacagatatggagaggctcaaagatgtacagtcaatggatgagctgaaa
gatgtctacaaccatttcctgctgtactatggtcgggacatccccaagatgcaaaatgct
gcaaaggctagccgcaagaagctgaagcgtgtaagggaggagggagatgaagaaggtgaa
ggtgaggaagcagaagatgaggaacagagagggccagaacttaagcaggcctcccgtcga
gacatgtataccatctgccagagtgcggggctagatggcttggccaaaaagtttgggctt
actcctgagcagtttggagagaacctccgggacagctatcagcggcatgagacagagcag
ttcccggcagagcccttagagctggccaaggactatgtttgcagccagttccccactccg
gaagctgtgctagaaggtgcccgctacatggtagcattacagattgctcgggaacccctt
gttcggcaggtgctgaggcagaccttccaggaaagagccaagctaaatataactcctacc
aagaaaggtagaaaggatgtggatgaggcccactatgcctattcctttaaatacttaaag
aataagcctgttaaagaactgagagatgaccagttcctgaagataggcctggctgaagat
gaaggactactcaccattgacatcagcatagatatgaaaggagtggaaggctatggcagt
gaccagacatactttgaagagatcaaacaattttactaccgagatgagttcagtcaccag
gtacaagagtggaaccggcaacgcaccatggccattgagcgagctttacagcagttcctt
tatgtgcaaatggccaaagagctcaagaacaagctgctggctgaggccaaggaatatgtc
ataaaagcctgtagccgaaagctctacaactggttgagggtagcaccttaccgaccagat
caacaagtagaggaagatgatgactttatggatgagaaccaagggaagggcattcgagtc
ctaggcattgctttctcctctgccagagatcaccctgtattctgtgccctggtcaatggt
gaaggagaagtgacagactttctccggctgccccattttaccaaacggcgaactgcatgg
agagaagaagagcgagaaaagaaggctcaagatattgaaactctaaagaaatttcttctg
aataagaagcctcatgtggtgacagttgcaggagagaacagggatgcccagatgttgatt
gaggatgtgaagcgcattgtgcatgagctggaccaaggccaacaactgtcttctattggc
gtggagctggtcgataatgaattggccattctttatatgaacagcaagaagtcagaggca
gagttccgggattacccaccagtactgagacaggctgtctccctggcccggcgaattcaa
gaccctctgatagagtttgcccaggtgtgcagctctgatgaagacatcctatgtctcaag
tttcaccccttgcaggagcatgttgtcaaagaggaactcctcaacgccttatactgtgaa
ttcatcaaccgggtcaatgaggttggagttgatgtcaaccgtgccattgcccatccttac
agccaggctttgatccagtatgtgtgtggcctggggcctcggaaaggaactcacctgctg
aagatcctgaagcaaaacaacactcgacttgagagccgaacccaactggtcaccatgtgc
cacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacagcctcc
ctgggggacagcactgattcatacattgaagtccttgatggttcccgtgtccaccctgag
acctatgaatgggccaggaagatggcagtagatgctctggaatatgatgaatctgctgag
gatgccaatcctgcaggagcccttgaagaaatcttggaaaacccagagcgactcaaggac
ttagatcttgatgcctttgccgaagaactagagaggcagggctatggtgacaaacacatc
actctttatgacatccgagcagagctgagttgtcggtataaggacctccggacaacctac
cgctctcccaatacagaagaaatcttcaatatgttaaccaaagaaacaccagagactttc
tatattggaaagctcatcatctgcaatgtcactggcattgctcacaggcgcccacagggt
gagagctatgaccaagccatccgcaatgatgagacagggctgtggcaatgccccttctgc
caacaagacaactttcctgaattgagtgaggtctggaaccactttgatagtggttcatgc
cctggccaggctatcggtgtcaaaacacggcttgacaatggtgttactggcttcatcccc
actaaattcctcagtgacaaagtggtaaagcgaccagaggaaagagtaaaggtgggaatg
actgttcactgccgcatcatgaagattgacattgagaagttcagtgcagacctgacctgc
cgcacttcagacctcatggacaggaacaacgagtggaaactgcccaaggacacctactat
gacttcgatgcagaagcagcagaccacaagcaggaagaggacatgaagcggaagcagcag
cggactacatacattaagcgagtgattgcacatccatccttccataacatcaatttcaag
caagcagaaaaaatgatggagactatggaccagggggatgttattatccgaccaagcagc
aagggtgagaaccacctgacagtgacgtggaaagtcagtgacggcatctaccagcatgtg
gatgtacgagaagagggcaaggaaaatgccttcagcctgggagccactctgtggatcaac
agtgaggaatttgaagacttggatgaaatagttgcccgctatgtccagcccatggcatcc
tttgcccgggacctcctgaatcacaagtattaccaagactgtagtggtggagaccgcaag
aaattagaggagctgcttatcaaaactaagaaggagaagcccaccttcatcccttatttc
atctgtgcctgcaaggaactgcctggcaagttcctcctgggataccagccccggggtaaa
cccaggatagaatacgtaacagtaactcctgaaggattcaggtaccggggccagatcttc
ccaactgtgaatgggcttttcaggtggtttaaagatcactaccaggaccccgtaccaggc
atcactccaagtagcagcagtaggacccggactcctgcctctatcaatgctactccagcc
aacatcaaccttgcagatctgacacgagctgtgaacgccttgccccagaacatgacatca
cagatgttcagtgccattgctgctgtgacaggccagggacagaaccctaatgctacccca
gcccagtgggcctccagccagtatggctatggtggcagtggaggcggcagcagtgcctat
catgtgttcccaacgccagcccagcagccagtggccacaccactaatgactcccagctac
tcctacacaaccccaagccagcccatcaccacgcctcaataccaccagctccaggccagc
accaccccacagtctgcccaggctcagccccagccttcatccagctcccggcaacggcag
cagcagccaaagtccaacagccatgcagccatcgattgggggaaaatggcagagcagtgg
cttcaggagaaggaggcagaacgacggaaacagaagcagcggctgacacctcgaccctct
cccagccccatgatcgaaagcacccccatgtccattgctggcgatgcgaccccgctcctg
gatgagatggatcggtag
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integrated database retrieval system
