Perognathus longimembris pacificus (Pacific pocket mouse): 125365879
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Entry
125365879 CDS
T08928
Symbol
Srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04152
AMPK signaling pathway
plop04910
Insulin signaling pathway
plop04931
Insulin resistance
plop04932
Non-alcoholic fatty liver disease
plop04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
125365879 (Srebf1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125365879 (Srebf1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
125365879 (Srebf1)
04932 Non-alcoholic fatty liver disease
125365879 (Srebf1)
04931 Insulin resistance
125365879 (Srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125365879 (Srebf1)
04131 Membrane trafficking [BR:
plop04131
]
125365879 (Srebf1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
125365879 (Srebf1)
Membrane trafficking [BR:
plop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125365879 (Srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
125365879 (Srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
125365879
NCBI-ProteinID:
XP_048222117
LinkDB
All DBs
Position
17:14204801..14229708
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AA seq
1154 aa
AA seq
DB search
MDELPFCEAALEQELAELSEVDAALLTDIEDMLQLLNNQDSDFPGLFDPPYAGGGAGGPD
PSSPGPSSPGTLSPPPAALSSPLEALLGAPKSTSPPLSPPQSSPAPLKMYPSVPPFSPGP
GIKEEPVPLTILQPSPTPQPLPGTLLPQSFSAPAPSPSPAPAPAPGPAPSQFSSAPVLSY
SSPPGSFSTGPLPASAQPPLPGLPLASTPGGQPVSMNTQVQGAAAPQLLTATAAPGATTV
TSQIQQVPVLLQPHFIKADSLLLTTMKTDVGATVKTAGIGALAPGATVQAGPLQTLVSGG
TILATVPLVVDTDKLPINRLAAGKGPGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDL
VVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAAHKSKSLKDLVSTCGNGGS
TDVPMDGLKPEVMDTLTPPPSDAGSPSQSSPLSRGSGGSGSGSDSEPDSPVFEDSQVKPE
QLSSSHSRGMLDRSRLALCALVFLCLSCNPLASLLGSLSDATHVHHGPGRSMLEIEGRDG
TDWVPWLLPPLVWLANGLLVLVSLAFLFIYGEPVTRPHSGPAVHFWRHRKQADLDLARGD
FAQAAQQLWLALGALGRPLPTSHLDLACSLLWNLIRHLLQRLWVGRWLAGRAGGLQRDCT
LRADVRASARDAALVYHKLHQLHAMGKYTGGHLTATNLALSALNLAECAGDAVSMATLAE
IYVAAALRVKTSLPRALHFLTRFFLSSARQACLAQSGSMPLAMQWLCHPVGHRFFVDGDW
AVRSTPRESLYSLAGNPVDPLARVTQMFREHLLERALNCVAQPSPSSSPSPGSADGDREF
SDALGYLQLLNSCSDAAGAPACSFSISSSMVATTGTDPVAKWWASLTAVVIHWLQRDEEA
AERLYPLVEHLPQALQETERPLPKAALHSFKAARALLGRGKTEPGPTSLAICEKASGYLW
DSLATAPTSSSIDKAMQLFLCDLLLVVRTSLWRQQQPLASPQAAPGTSSGPQASALELRG
FQRDLSSLRRLAQNFRPAMRRVFLHEATARLMAGASPARTHQLLDRSLRRRAGPGGKGGA
AAELEPRPTWREHTEALLLASCYLPPGFLSAPGQRVGMLAEAARTLEKLGDRQLLHDCQQ
MLLRLGGGTTVTNS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctgcctttctgcgaggcggctctggagcaggagctggccgagcttagcgag
gtggacgcggcgctgctgaccgacatcgaagacatgcttcaacttctcaacaatcaagac
agcgactttcccggcctctttgatccaccctatgcagggggtggggccgggggtccagac
cccagcagccctggccccagctccccaggcaccttgtccccacctcctgctgctctgagc
tcccctctggaagccttgctgggggcgcctaagtcaacatccccacccttgtcccctccc
cagtcttcacccgccccactgaagatgtacccatctgtaccccccttttccccagggcct
ggtatcaaagaagagccagtgccgttaaccatcttgcagccttctcccaccccacagccc
cttccagggaccctcctgccccagagcttctcagccccagccccatccccatccccagcc
ccagccccagccccaggtccagccccctctcagttcagctctgccccagttttgagctac
tctagtcctcctggcagcttctccacagggccccttccagccagtgcccagccaccgctc
cctggcctgcctctggcttccacacctggaggccagcccgtgtccatgaacactcaggtg
cagggtgcagctgccccgcagctattgacagccacagcagctcctggagcaaccacggtg
acctcgcagatccagcaggttccggtcctgctgcagcctcacttcatcaaggcagattcg
ctgctgctcacaaccatgaagacggacgtaggggccactgtgaagacggcgggcatcggt
gccctggcccctggtgccactgtgcaggcagggcccttgcagaccctggtgagtggtgga
accatcctggctacagtgccgctggttgtggatactgacaagctgcccatcaaccggctg
gcagctggcaagggcccaggctcagctcagagtcgcggtgagaagcgcacggcccataat
gccatcgagaagcgctaccgctcctccattaacgacaagatcgtagagctcaaggacctg
gtggtgggcactgaagcgaagctgaataaatctgctgtcttgcgcaaggccatagactac
atccgcttcttacaacacagcaaccagaaactaaagcaggaaaatctgagtcttcgaact
gctgcccacaaaagcaagtcgctgaaggatctggtgtccacttgtggcaatggaggaagc
acagatgtgcccatggacggcctgaagcccgaggtgatggacacgctgacacccccgccc
tcagatgccggctcaccctcccagagcagccctctgtcccgtggcagtggtggcagtggc
agtggcagtgactccgagcccgacagcccagtcttcgaggacagtcaggtgaagcccgag
cagttgtcgtcctcccacagccggggcatgctggatcgttcccgcttagctctgtgtgct
ctggtcttcctctgtctgtcttgtaaccccctggcctccctgctgggcagcctctctgat
gccacccacgtccaccacggtcctgggcgtagcatgctggagattgaaggcagagatggc
actgattgggtgccatggctgctgcccccgctggtctggctggccaatgggctactggtg
ctggtctccttggcatttctcttcatctacggggaaccggtgacacggccccactctggc
cccgctgtgcacttctggagacaccgaaaacaagctgacctggacctggctcggggggac
ttcgcccaggccgcccagcagctgtggctggctctgggagctctgggccggccgctgccc
acctcccacctggacctggcctgcagcctgctctggaacctcatccgccacctgttgcag
cgcctctgggtgggccgatggctagcaggccgggccgggggcctgcagagggactgcacc
ctgagagcagatgtgcgtgccagtgccagggacgcggcccttgtctaccataagctgcac
cagctgcatgccatggggaagtacacaggcgggcacctcactgctaccaatctagcactg
agtgccctgaacctggccgagtgtgccggggacgctgtgtccatggcgacactggcagag
atctatgtggcagcagccctgagggtcaagaccagtctcccaagggccctgcacttcctg
acgcgcttcttcctgagtagtgctcgccaggcctgcctagcacagagtggttccatgcct
ctcgccatgcagtggctctgccaccctgtgggccaccgtttcttcgtggatggggactgg
gccgtgcgcagcaccccacgggagagcctctacagcttggccggaaacccagtggatccc
ctggcccgggtgactcagatgttccgtgagcatctcttggagcgagcgctgaactgtgtg
gcccagcccagcccaagctccagccccagcccagggtcagcagatggggacagggaattc
tcagatgccctcgggtacctgcagctgctgaacagttgctcggatgctgctggggctccc
gcttgcagcttctccatcagctccagcatggttgccactactggtaccgaccctgtggcc
aagtggtgggcctcgctgacggctgtggtgatccattggctgcagcgggatgaggaggcg
gcggagcggctgtacccactggtggagcacctgcctcaagctctgcaggagaccgagaga
cccctgcccaaggctgccctgcactccttcaaggctgcccgagccctgctgggccgtggg
aaaacagagcctggtccaaccagcctggccatctgtgagaaggccagtgggtacctgtgg
gacagtctggccactgcaccaaccagcagctccattgacaaggccatgcagctgttcctg
tgtgacctgctccttgtggtacgcactagcctgtggcggcagcaacagccactggcctca
ccgcaggcagccccgggcaccagcagcggaccccaggcctctgccctggagctgcgtggc
ttccaaagggacctgagcagcctgcggcgcctggcacagaacttccggcctgccatgagg
agggtattcctacatgaggccacagcacggttgatggcaggagccagccctgcccggaca
caccagctcctggaccgcagtctgagaaggcgggcaggccccggtggcaaaggaggcgcg
gcagcggagctggagccccggcccacgtggcgggagcatactgaggccttgctgctggcc
tcctgctacctgcctcccggcttcctgtcggctcctggacagcgcgtgggcatgctagcc
gaggccgctcgcacgctcgagaagctcggcgatcggcagctgctgcatgactgccagcag
atgctcctgcgcctgggcggcgggaccactgtcactaacagctag
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