Perognathus longimembris pacificus (Pacific pocket mouse): 125365957
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Entry
125365957 CDS
T08928
Symbol
Rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125365957 (Rffl)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125365957 (Rffl)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125365957 (Rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
SAP
FYVE
Prok-RING_4
zf-RING_5
FYVE_2
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125365957
NCBI-ProteinID:
XP_048222233
LinkDB
All DBs
Position
17:complement(23844534..23917644)
Genome browser
AA seq
374 aa
AA seq
DB search
MKFAVPDATDFIMWATCCNWFCLDGQPEEVPPPQGARTQAYSNPGYSSFPSPTGSEPSCK
ACGANFASTARKQTCLDCKKNFCMTCSSQEGNGPRLCLLCQRFRATAFQREELMKMKVKD
LRDYLSLHDISTEMCREKEELVFLVLGQQPIISEEDRTRAPALSPDFPEQQAFLNQPHTS
SVPATSPSLPSSPAQATSVPPAQAQENQANGHVSQDHEDPIYPQSTARAPAEDETQSTDS
EDGFIPGRRASLSDLTHLEDIEGLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQ
KGLQHLVCGAEDQNGAAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPI
CRQYVIRAVHVFRS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgctgtgccagatgccacagattttatcatgtgggcaacttgctgcaactgg
ttctgcttggatggacagcctgaggaggtccccccaccccagggagccaggacgcaagcc
tattccaatcctgggtacagttccttcccctccccaacaggctcggagccaagctgcaag
gcctgtggggccaattttgcaagcacagcccggaagcagacctgcttggactgtaagaaa
aatttctgcatgacctgttcgagccaggaggggaatgggccccgcctctgccttctctgc
caacggttccgagccacagcatttcagcgggaggagctcatgaagatgaaggtgaaggat
ctcagggactatctcagcctccatgacatctccactgaaatgtgccgggagaaagaagag
ctggtgttcttggtgcttggccagcagcctataatctctgaggaggacaggactcgtgcc
cctgccctgtccccagacttccccgagcagcaggccttcctgaaccagcctcacaccagc
tctgtacctgctacctcacccagcctcccttcttcacctgcacaggccacctctgttccc
ccagcccaggctcaggaaaaccaggccaatggccatgtgtctcaggaccacgaggatccc
atctacccgcagagcacagccagagcacctgctgaggatgagacccagtccactgactca
gaggatggctttatcccaggccggagggcctctctgtctgacctgacgcacctggaggac
atcgaaggcctgacagtccggcagctgaaagaaatcctggctcgcaactttgtcaactac
aagggctgctgtgagaagtgggagctgatggagagagtgacccggttatacaaggatcag
aaaggactgcagcacctagtgtgtggtgctgaagaccaaaacggagcagcagtgccatct
ggcctggaagagaacctatgtaagatctgcatggactcacctattgactgtgttctgctg
gagtgtggccacatggtgacctgtaccaagtgtggcaagcgcatgaacgagtgtcctatc
tgccggcagtatgtgatccgagcagtgcatgtcttccggtcctga
DBGET
integrated database retrieval system
