Perognathus longimembris pacificus (Pacific pocket mouse): 125365976
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Entry
125365976 CDS
T08928
Symbol
Gemin4
Name
(RefSeq) gem-associated protein 4
KO
K13132
gem associated protein 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125365976 (Gemin4)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
125365976 (Gemin4)
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Gene cluster
GFIT
Motif
Pfam:
TPR_Edg1
Motif
Other DBs
NCBI-GeneID:
125365976
NCBI-ProteinID:
XP_048222287
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Position
17:complement(17507387..17514509)
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AA seq
1058 aa
AA seq
DB search
MDLGPLNICEEMTILHGGFLLAEQLFRPKALVQLTKSDWEHVGQPIVEALREISSATAHS
QPFAWKKKALIIIWAKVLQPYPVSPSDTETRWQEDVFFSVGNMIPNINHTVLFELLKSLE
ASGLFIELLMALPTTICRTELEHFLEHMTVDTSSKDVAFFLDVWWEMMKHKGNQQDPLLS
QFTIMAHKYLPSSDEFSHPPKRFKSDPDVCPTMPLLAMLLNGLKKIQKRILCLGMKCCAL
ANLADMLTVFALIEDEPQEVSATTYLDKLATVISVWNSDTQNPYHQQALAEKVKEAERDV
SLTSLAKLPSETISVGFEFMHSLLREWGEELQVMLNSSQGTNYDSYRLCDSLTSFSQNLK
LYLDTTSLSKEERQVVSELAECVKDFLQKTSRVLHNKNVEDITASIAMAIIEQKMDRHME
MCYIFASEKKWAFSDEWVACLVSNRALFREPDLVLRLLETVMEVTVTDRAIPESQIKQVI
GLILECYADLSLPDKNKVLSGVLHCWGRKGLSERLLDYLEGFKEDLNTTFNQLTQSASEQ
GLTKAVASVARLVILHPEVTVKKMCSMAVINLGTHRFLAQILTAFPALRFTEAQGPNSST
TFVVSCLKETVWTKFSTPKEEKQFLELLSCLMSPVKPQGIPVAALLEPDEVLREFVLPFL
MLDVEVVDLSLKIFIQTLEADAGLEEYWLQTCSPFPILFSLCQLLDSFTKYWQLPQEKRS
LPLDGKDLVVRILELLCAIVLGNAETFSPDTWIKSLSWLHRKLEQLDWTVGLRLKNFFEG
HFKCEVPATLFEICKLSEAEWTSQAHPGYGPGTGLLAWMECCYISSSISEQMLSVLVVDV
SNPEEVRLFSKGFLVALVQVMPWCSPQEWQCLHQLTRRLLEKQLLHVPYTLEYIQFVPLL
NLKPFAQELQLSVLFLRAFQFLCSQSCRNWLPMEGWSHVVKLLCGSLTNLLDSVRLTQSG
GPWAQGQDQDLTQEALFVYTQMFCHVLHIMAMLPQEVCEPLYVLALEILTCYETLSKTNP
SISSLLQKVNEQHFLKSIAENISPEDRRQTLLQKISNF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggacttaggacccttgaatatctgtgaagaaatgacaattctgcatgggggcttcttg
ctggccgagcagctgttccgccccaaagcattggtgcagttgaccaagtctgactgggaa
catgtcgggcagcccattgtggaggccttgagggagatttcctcagccacagcacattcc
cagccgtttgcctggaagaagaaagctctgatcatcatctgggccaaggtccttcagccc
taccccgttagcccttctgacactgagactcggtggcaggaggatgtgttcttttccgtg
ggaaacatgatcccaaacatcaaccacacagtcctttttgagctgctcaaatctctggaa
gcttctggcctctttatcgagctcctgatggccctgcccaccaccatctgccgcaccgag
ctggagcactttttggaacacatgactgttgacacttcttccaaggatgtggccttcttc
ctagatgtctggtgggaaatgatgaaacataagggcaatcaacaggaccccctgctctca
cagtttacaataatggctcataagtacttgccctcttcagatgagttctcccatcctcca
aagaggtttaagtcagacccagatgtgtgtcccaccatgcctctactggccatgctgctt
aatggactgaagaaaatccagaagagaatcctgtgtcttgggatgaagtgctgtgcacta
gccaacttggccgacatgctgacagtatttgccctgatcgaggatgaaccccaggaagtg
tctgccaccacatatctagacaagctggccacagtgatctccgtgtggaactcagacacc
cagaacccataccatcaacaggcactggcagagaaggtaaaggaagcagagagggatgtc
agcctgacctcactggccaaactccccagcgagaccatttctgttgggtttgagttcatg
cacagcctgctacgggagtggggggaggagctacaggtcatgctcaacagcagtcagggc
accaattacgatagctaccggttgtgtgacagtctgacatccttcagccagaacttgaag
ctctacctagataccaccagcctgtccaaggaggagaggcaagtggtctctgagctggct
gagtgtgttaaagacttcctgcagaaaaccagcagggtgctgcacaacaagaatgtcgag
gacatcactgcctccattgccatggccatcatcgagcagaagatggaccggcacatggaa
atgtgctacatttttgcctctgagaagaagtgggccttctctgacgagtgggtggcctgc
cttgttagtaacagggctctcttccgagagccggacttagttttgaggctgctggaaaca
gtgatggaagtcactgtgaccgacagagccatccctgagtctcagatcaaacaggtgatc
ggcttgattctagaatgctatgcagacctctcactgccagacaaaaacaaagtcctgtca
ggtgttctgcactgctggggacgaaaaggcctctctgagaggttgctggattacttggag
ggttttaaggaagatctcaatacgacatttaaccagctcacacagagtgcctcggagcag
ggcttgactaaagcggtagcctctgtggcccgcctggtaatactacaccccgaagtcaca
gtgaagaagatgtgcagcatggctgtgattaaccttggcacgcacaggttcctggctcag
atcctcactgccttcccagcccttaggttcacagaagcgcaagggccaaattcatccacc
actttcgtggtgtcatgcctcaaagaaactgtctggacaaagttctctacacccaaggaa
gaaaagcaatttttagaactcctgagctgcctgatgagtcctgtgaagccccagggtatc
ccagtcgctgctcttctggaacctgatgaggtgctaagggaatttgtcctgcctttcttg
atgctggatgtggaagtggtagacctcagtctgaagatcttcatccagaccctcgaagcc
gatgcaggcttagaggagtactggctccagacctgttccccattccccatcctcttcagt
ttgtgccagctcctggacagcttcaccaagtactggcagctccctcaggagaagcgaagc
ctccctctagatggaaaggatctagtggtccgcatcctggagctcctctgtgccatcgtg
ttaggcaatgcagagaccttctcccccgacacctggatcaagtcgctgtcctggctccac
cggaagctggagcaactagactggactgtgggcctgagactgaagaacttctttgagggc
cacttcaagtgtgaggtgccagccacactttttgagatctgtaagctttctgaggccgag
tggacctcccaggcccatcctggctacgggcctggcacagggctgcttgcgtggatggaa
tgctgctacatttccagcagcatttctgagcagatgctctcggtcctggtggtggacgtg
agcaatcctgaggaagtcagattgttcagcaagggctttctggtggctctggtgcaagtc
atgccctggtgcagcccacaagaatggcagtgccttcaccagctgaccaggagactgtta
gagaaacagctcctccatgtcccctacaccctggaatatattcagtttgttccgctgctc
aacctgaagccttttgcccaggagctccagctctccgtcctcttcctgagagctttccag
tttctctgcagccagagctgtcgtaactggcttcccatggaaggctggagccatgtggtc
aaactcctctgtggcagtctgaccaacctcctggactcagttaggttgacacagtcaggg
gggccctgggcccaagggcaagatcaggacctgacccaggaagccctgttcgtttatacc
cagatgttctgtcacgttctgcacatcatggccatgctcccacaagaggtctgtgagcct
ctctacgtgctggccttggaaatcctcacctgctatgaaaccctaagcaagaccaaccct
tctattagctcattgctccagaaggtaaatgagcagcacttcttaaagtctattgccgag
aacattagccctgaggaccggcgccaaaccctgttgcagaagatcagcaacttttga
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