Perognathus longimembris pacificus (Pacific pocket mouse): 125366005
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Entry
125366005 CDS
T08928
Symbol
Nle1
Name
(RefSeq) notchless protein homolog 1 isoform X1
KO
K14855
ribosome assembly protein 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125366005 (Nle1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125366005 (Nle1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
DSE1_N
WDR55
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
ASA1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR41
NLE
Beta-prop_VPS8
PAC11
CFAP251_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_RFWD3
TRM82_WD
Tricorn_2nd
RMC1_N
eIF2A
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
PD40
Beta-prop_NWD2_C
DNAI3_WD
Cytochrom_D1
CSTF_C
Motif
Other DBs
NCBI-GeneID:
125366005
NCBI-ProteinID:
XP_048222334
LinkDB
All DBs
Position
17:complement(23955664..23965447)
Genome browser
AA seq
484 aa
AA seq
DB search
MAAVAEAEARDVQRLLVQFQDEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAF
YVHDAEIISSLEKTLEESQAVETEKILDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVA
FSPTAKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQIL
LWDPSTGQQVGRTLTGHSKWVTGLSWEPLHVNPECRYVASSSKDGSVRVWDTTAGRCERI
LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL
RTGAFEPAEATVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAED
KKPLARMTGHQALINQVLFSPDSRIMASASFDKSIKLWDGRTGKYLASLRGHVGAVYQIA
WSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLR
IWRR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcggaggcggaggcgcgcgacgtgcagcggctgctcgtgcagttccag
gatgagggcgggcagctgctgggctccccgttcgacgtgccggtggacatcacccccgac
cggctgcagcttgtgtgcaacgcgctgctggcgcaggaggatcctctgcccctggctttc
tatgtccatgatgccgagatcatctcctcgctggagaagacgctggaggagtcccaggca
gtggagacagagaagattcttgatatcatttatcagccccaagctatcttcagggtgcgg
gctgtgacccgctgcaccagttccttagagggtcacagcgaggcagtcatttcagtggcc
ttcagccccaccgcaaagtacctggccagtggctctggcgacaccactgtgcgcttctgg
gatctcagcacagagacaccacatttcacttgcaagggacacagacattgggtgcttagc
atatcctggtccccagatggcaagaagctggcctcaggctgcaagaatggccagattctc
ctgtgggacccgagcacagggcagcaggtgggcaggacccttactggccacagcaagtgg
gtcacgggcctgagctgggagcccctccacgtgaatccagagtgccgttatgtggccagc
agctccaaggatggcagtgtgcgggtctgggacacaactgcaggccgctgtgaacgcatt
ctcaccgggcacacccagtcagtcacttgcctccgttggggaggagatgggcttctatac
tctgcctcccaggaccgcaccattaaagtctggagggcgcatgatggcgtgctgtgccgg
actcttcaaggccatggccactgggtgaacaccatggcactcagcactgactatgccctg
cgcacaggggcctttgagcctgctgaggccacagttaatgcccaggaccttcggggatcc
ttgcaggaactgaaggagagggcgctgagccggtacaacctggtgcggggccaaggccca
gagaggctggtgtctggctcagatgacttcaccttattcctgtggtctccagcagaggac
aagaagcccctcgcacggatgacgggacaccaggccctcatcaaccaggtgctcttttct
cctgactcccgtatcatggccagtgcctccttcgacaagtccatcaagctttgggatggc
aggacgggcaagtacctggcttccctgcgtggccacgtgggtgctgtgtaccagattgcc
tggtcagctgacagccggctgctggtcagtggcagcagtgacagcaccctgaaggtgtgg
gacgtgaaggcccagaagctggctgcagacctgcctggccacgcagatgaggtgtatgct
gtggactggagtcctgatggccagagagtggcaagtggtgggaaggacaagtgcctccgg
atatggcggagatga
DBGET
integrated database retrieval system
