Perognathus longimembris pacificus (Pacific pocket mouse): 125366007
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Entry
125366007 CDS
T08928
Symbol
Med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125366007 (Med13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125366007 (Med13)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125366007 (Med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
125366007
NCBI-ProteinID:
XP_048222341
LinkDB
All DBs
Position
17:complement(26898713..26999682)
Genome browser
AA seq
2169 aa
AA seq
DB search
MSSSFVQNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGEDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHITLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCCSKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFSTDST
SHHGGKIPRKLANHVVDRVWQECNMNRAQNKRKYSASSGGLCEEEIANKVASWDFVEVTQ
RTSCSCLRHKNLKPRNAGQQGQAPSCQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRVSI
SDDVGMDTDSASQRLVISAPDSQVRFSNIRTNDVAKTPQMHATEMANSPQPPPLSPHPCD
VVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPPQFQEAVEPTVYVGT
AVNLEEDEANIAWKYYKVPKKKDVEFLPPQLPSDKFKDDPVGPFGQESVTSVTELMVQCK
KPLKVSDELVQQYQIKNQYLSAIVPDAEQEPKIDPYAFVEGDEEFLFPDKKDRQNSDREA
GKKHKAEDGTPSVTVLSHEEDAMSLFSPSIKQDAPRPNSHARPPSTSLIYDSDLAVSYTD
LDNLFNSDEDELTPGSKKSANGSDDKANCKESKTGNLDPLSCISTADLHKMYPTPPSLEQ
HILGFSPMNMNNKEYGSMDTTPGGTVLEGSSSSIGAQFKIEVDEGFCSPKPSEIKDFSYV
YKPENCQVLVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLELLPSGPSMPFIKE
GSDGNNMDQEYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTP
RGTGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSVPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLF
LEDELDIIGRNTDCGKEAEKRFEALRANSAEHGGLKESEKLPDELILLLQDQCTNLFSPF
GVTDQDPFPKIGVISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSSCLHP
WSKRTDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYG
TDESPEPLPIPTFLLGYDYDFLVLSPFALPHWERLMLEPYGSQRDIAYVVLCPENEALLN
GAKSFFRDLTAIYESCRLGLHRPISRLLTDGIMRVGSTASKKLSEKLVAEWFSQAADGDN
EAFSKLKLYAQVCLFDLGPYLASQPLDSSLLSQPNLAAPTNQSLIPPPQMANTGNANTPS
ATIASAASTTMTMTSGVAISTSLTTANSTLTTTSSSSSASLNSGVSSNKLPSFPPFGTMN
SSGTGPMSTQASTVQSGPLGGQPSSALQTTGIAGESSSLPTQPHPDVSESTMDRDKVGIP
TDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTV
SAQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLAME
TALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILA
SCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRL
GRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVI
MPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAF
NPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTTSPVHSPGSHYPHGGDAGKGQGTDR
LLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVP
SVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVLNQ
LYNFIMNML
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtgcagaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggctgacttgaccggaattaaatggaaacgatatgtatggcaaggcccaacctct
gctcctattctgtttccggtgactgaagaagaccccattttaagcagttttagtcgctgc
cttaaggcagatgtactaggggtttggcggcgagatcaaagacctggaagaagagaattg
tggatattttggtggggtgaagaccccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtatgggagaatggactttcctatgaatgccgcactctgcttttc
aaagcagttcacaatctgttggaaaggtgtttaatgaaccggaactttgtacggattggc
aagtggtttgtaaagccttatgaaaaagacgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtataccttctcagtgaagagcatatcactcttgctcaacagtct
aatagcccatttcaagttatcttaagcccatttggactaaatggcactctcacaggacag
gcattcaagatgtctgattcagccacaaaaaaattgattggtgaatggaaacagttctat
cctatctcttgttgctcaaaggaaatgtctgaagagaaacaggaagatatggattgggaa
gatgattctttagctgcagtagaagttcttgtcgctggtgttcgaatgatctacccagca
tgctttgttctagtccctcagtcagacattcctactcctagctctgtgggatcctctcat
tgttcagcttcttgcttgggtgtccaccaagtgcctgcttccacacgagatcctgctatg
tcttcagttactcttacaccacctacatcgcctgaggaagtccaaacagttgatcctcag
tctgcccagaaatgggtcaaattttcttcagtatctgatggcttcagtactgatagtact
agccaccatggtgggaaaatacccagaaaattagcaaatcatgtggtcgatagagtttgg
caagaatgcaatatgaacagagcacagaacaagaggaagtattctgcttcatcaggtggc
ctatgcgaagaggagatagctaataaggtagcatcttgggattttgttgaagtcacacaa
agaacaagctgcagttgtttgaggcacaaaaatctcaaaccaagaaatgctggacaacaa
ggacaggcgccatcttgtcagcaacaagtacttcctaagcacaagaccaatgagaagcaa
gaaaagagtgaaaagccacagaaacgccccttgaccccttttcaccatcgtgtatctatt
agtgatgatgttggcatggacactgattcagccagccaaagacttgtaatctctgcacca
gacagtcaagtgagattttcaaacatccgaactaatgatgtagcaaagactcctcagatg
catgccactgaaatggcaaattcacctcaaccacccccacttagtcctcacccatgtgat
gtagttgatgaaggcgtgactaaaacaccttcaactcctcagagtcaacatttttatcaa
atgccaacaccggatcccttggttcctactaaaccaatggaagataggatagacagtttg
tcccagtctttcccacctcagttccaggaagctgtagaacctacggtatatgttggtaca
gcagtaaacttggaagaagatgaagctaatatagcctggaagtattacaaagtcccaaag
aaaaaagatgtagagtttttaccacctcaacttccaagtgataaattcaaggatgatcca
gttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcagtgtaag
aaacctttaaaagtttctgatgaactagtgcagcaatatcaaattaaaaatcagtatctt
tcagcaatagtacctgatgcagaacaagaacctaaaattgatccatatgcattcgttgaa
ggagatgaggaattcctttttcctgataaaaaagatagacaaaatagtgacagagaagct
ggaaagaaacacaaggcagaagatgggacacctagtgttacagtgttatcacatgaagaa
gatgctatgtcattatttagtccctctattaagcaagatgccccacgccctaatagtcat
gctcgtcctccatcaaccagtttgatttatgactcagacctggctgtctcctatactgac
ctagataatctcttcaattctgatgaagatgaactgacacctggatctaaaaaatcggcg
aatggatctgatgataaagccaactgcaaagaatcaaagacaggaaatctggatccctta
tcatgcataagcactgcagatcttcataagatgtatcctacaccaccatcattggaacaa
catattttgggattttccccaatgaatatgaataataaagaatatggtagtatggataca
acacctggaggaactgttctagaaggaagtagttctagtataggagcacagttcaaaatt
gaggttgatgagggattttgtagcccaaaaccttctgaaattaaagatttttcttatgtt
tataaacctgaaaattgtcaagtactagtgggatgttccatgtttgcacctctaaaaact
ctgccaagccaatgtctgccccctatcaaattgcctgaagagtgtatttaccgccagagt
tggactgttggaaaattagaattgcttccttccgggccttcaatgccattcatcaaagag
ggtagtgatgggaataatatggatcaagaatatggccctgcttatacacctcaaacccat
acatcttttgggatgccccctagcagtgcaccacctagtaacagtggagcaggaattctt
ccttctccatccactcctaggtttccaactccaaggactccaaggacacctcggactcct
cgtggaactggtgggcctgcaagtgctcaaggttcagtcaaatatgaaaattcagacttg
tactcaccagcctccaccccatctacatgcagaccccttaattctgttgaacccgcaact
gtcccttctgtccctgaagcacatagtctttatgtaaacctcatcctctcagagtcagtt
atgaatttgtttaaagactgtaactttgatagttgctgtatctgtgtctgcaacatgaat
atcaagggtgccgatgttggagtttacattccagatccaacacaggaagcacagtatagg
tgtacctgtggcttcagtgcagtcatgaacaggaaatttggaaacaattcaggactattt
cttgaagatgaactagacatcataggacgcaacaccgactgtggtaaagaagcagaaaaa
cgttttgaagctctcagggctaactctgctgaacatggaggtctaaaagaatctgaaaaa
ttgcctgatgagttaatattattactgcaggatcagtgcactaatttattttcacccttc
ggagtaacagaccaagatccttttcccaaaattggtgtaattagcaattgggttcgtgta
gaagagcgtgactgttgtaatgactgctatcttgcattagaacatgggcgtcagttcatg
gataacatgtcaggaggaaaagttgatgaagcacttgtaaaaagttcatgcctacatccc
tggtccaaacgaactgatgtgagtatgcagtgctcacaggatatacttcgaatgctcctc
tcacttcagccagttcttcaggatgctattcagaagaaaagaacagtaagaccttggggg
gtccaaggtccgcttacctggcaacagtttcacaaaatggctggccgaggctcttacgga
actgatgaatctccggaaccactgcctatccccacatttttgttgggttacgattatgat
tttctggtgctttctccatttgctctccctcattgggagagacttatgctggaaccttat
gggtctcaaagagatatagcctatgttgtactatgtccagagaatgaagctttgttaaat
ggagccaaaagcttttttagagatcttaccgcaatatatgagtcttgtcgattaggtctg
catagacctatttctcgactgctgacagatggaatcatgagagtgggatctactgcctca
aagaaactatcagaaaagttggtagcagaatggttttctcaggcagcggatggtgacaat
gaagctttttctaaactcaagctttatgcacaagtctgcctatttgatctaggtccttat
cttgcttcccagccactggatagctctctgctttcccagccaaacttagctgcccctacg
aatcagtctttgattcctccacctcagatggcaaatactggaaatgctaatactccatct
gccaccatagcatctgcagcaagtaccactatgacaatgacttcgggtgttgccatatca
acttcacttaccacagctaattcgactttgactaccacttcatcttcatcctctgccagc
ttgaatagtggagtatcatcaaataaattaccttcatttccgccttttggcactatgaac
agtagtggtacaggacccatgtctacacaagcaagtacagttcagagtggcccactagga
ggtcaaccatcatcagctttacagacaactggaattgcaggagagtcatcatcacttccc
actcaaccacatcctgatgtgtctgaaagcacaatggatcgtgataaagtgggaatccct
actgatggtgattcacatgcaattacctatcctcctgcaattgttgtttatataatcgat
ccttttacatatgaaaataaagatgagagcactaactcttctaatgtatggactttgggg
ctactccgatgctttctggaaatggtccagactcttcctcctcatatcaagagtactgtt
tctgcacagattgttccttgtcagtacctgttacaacctgtgaagcatgaagatagacag
atctatacccagcatttaaaatctctagctttttcggtctttacccagtgtcggagacca
cttccgacatcaaccaatgtgaaaacattgactggctttggtccaggtttagccatggaa
actgctcttaaaagtcctgatagaccagagtgtattcggctttatacgcccccttttatt
ctggctccagtaaaggacaaacagaccgagctaggagaaacatttggagaagctggacaa
aaatacaatgttcttttcgtaggttattgtttatcacatgatcaaaggtggattcttgca
tcctgcacagatctatatggagaacttttagaaacctgcatcattaacatcgatgttcca
aatagggctcgtcggaaaaaaggttctgctagaagatttggtctacagaaactttgggag
tggtgtttaggacttgtgcaaatgagttcattaccatggagagttgtaattggtcgtctg
ggaaggataggtcatggagaattgaaagattggagctgtttgctgagtcgtcgaaacttg
cagtctttaagtaaaaggctcaaagacatgtgtagaatgtgtggtatatctgctgcagac
tctcccagcattctcagtgcttgcttggtagcaatggaaccccaaggttcttttgttatt
atgccagattctgtgtcaactggttctgtttttgggagaagcactactctaaatatgcag
acatctcagctaaataccccacaagatacatcttgtactcatattcttgtgtttcctact
tctgcttctgtacaagtagcttcagctacatataccactgaaaatttggatttagctttc
aatcccaacaatgatggagcagatggaatgggtatctttgatttattagacacaggagat
gatcttgatcctgatattattaatatccttcctgcatctccaactacatctcctgtacac
tctccaggatctcattacccccatggaggtgatgctggcaagggtcaaggtacagatcgg
ctactttcaacagaatctcatgatgaagtaactaatattcttcagcaaccattggccctt
ggatactttgtatcaactgccaaagcgggtccattacctgactggttctggtcagcatgt
cctcaagcacaatatcagtgtcccctttttcttaaggcctctttgcacctccacgtgcct
tcagtgcaatctgacgagctgcttcacagtaaacactcccacccacttgactcaaatcag
acttcagatgtcctcaggtttgttttggaacagtataatgcactctcctggctaacctgt
gaccctgcaatccaggacagacgctcatgtctcccaattcattttgtggtgctgaatcag
ttatataactttatcatgaatatgctgtga
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integrated database retrieval system
