KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125366044
Entry
125366044         CDS       T08928                                 
Symbol
Psmb6
Name
(RefSeq) proteasome subunit beta type-6 isoform X1
  KO
K02738  20S proteasome subunit beta 1 [EC:3.4.25.1]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050  Proteasome
plop05010  Alzheimer disease
plop05012  Parkinson disease
plop05014  Amyotrophic lateral sclerosis
plop05016  Huntington disease
plop05017  Spinocerebellar ataxia
plop05020  Prion disease
plop05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    125366044 (Psmb6)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125366044 (Psmb6)
   05012 Parkinson disease
    125366044 (Psmb6)
   05014 Amyotrophic lateral sclerosis
    125366044 (Psmb6)
   05016 Huntington disease
    125366044 (Psmb6)
   05017 Spinocerebellar ataxia
    125366044 (Psmb6)
   05020 Prion disease
    125366044 (Psmb6)
   05022 Pathways of neurodegeneration - multiple diseases
    125366044 (Psmb6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:plop01002]
    125366044 (Psmb6)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:plop03051]
    125366044 (Psmb6)
Enzymes [BR:plop01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     125366044 (Psmb6)
Peptidases and inhibitors [BR:plop01002]
 Threonine peptidases
  Family T1: proteasome family
   125366044 (Psmb6)
Proteasome [BR:plop03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   beta type subunits
    125366044 (Psmb6)
SSDB
Motif
Pfam: Proteasome
Other DBs
NCBI-GeneID: 125366044
NCBI-ProteinID: XP_048222392
LinkDB
Position
17:7916392..7919721
AA seq 239 aa
MAATLVTAGRMGPSPAWGPEAIAPDWENREVTTGTTIMAVQFDGGVVLGADSRTTTGSYI
ANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEM
CYRYREDLMAGIIIAGWDPQEKGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREG
MTKDECLQFTANALALAMERDGSSGGVIRLAAIEESGVERQVLLGDKIPKFTIATLPPP
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggccaccttggtaactgcaggaagaatggggccttccccggcatggggacccgag
gccattgctcctgactgggaaaaccgggaagtgaccacagggaccacgatcatggctgtg
cagtttgacgggggcgtggttctgggggctgactccagaacaaccactgggtcctacatc
gccaaccgagtgactgacaagctgacccctattcatgaccgaattttctgctgtcgctca
ggctcagcagctgatacccaagcagtagcagatgccgtcacttaccagcttggtttccac
agcattgaacttaatgagcctccactggttcatacagcagccagtctctttaaggagatg
tgttaccgataccgcgaagacctgatggcaggaatcatcatcgcaggctgggaccctcaa
gaaaaagggcaggtgtactcagttcctatgggaggtatgatggtgagacagtcctttgcc
attggaggctctggaagctcatatatctatggctatgtggatgctacctaccgggaaggc
atgaccaaggacgaatgtctacagttcactgccaacgctctcgctttggccatggaacgg
gatggctccagtggaggcgtaatccgcctggcagctattgaagaatcaggagtagagcgg
caggtcctcttgggagataaaataccaaaattcaccattgccactttaccacccccctga

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