Perognathus longimembris pacificus (Pacific pocket mouse): 125366102
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Entry
125366102 CDS
T08928
Symbol
Fbxo39
Name
(RefSeq) F-box only protein 39
KO
K10314
F-box protein 39
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125366102 (Fbxo39)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125366102 (Fbxo39)
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GFIT
Motif
Pfam:
F-box-like
F-box
F-box_5
LRR_6
Motif
Other DBs
NCBI-GeneID:
125366102
NCBI-ProteinID:
XP_048222477
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Position
17:9797091..9804027
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AA seq
443 aa
AA seq
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MDEEGDLIQPQDQSCWATLPDVCLRRVFWWLGDRDRSRAALVCRKWNQMMSSADLWRHRT
ITFSGRPSRAHASEFESALWYVKKFGRYLEHLEIKFLNPYNAVLTKKFQITMRGLLACLG
KSNSRLKSLSIQHLEMDRLVWRNSIRNSLIKSLSFFLKKMGKHLDQLSLKGARLTVEQGC
GVLTSLSYLKNASMASELNIEDFFSHHLAVYSSPQFHKTMNTFHNLTSLTLNYNCISDEL
LESLGENNASTLGTMNIKCHIHDPHGQVVWGMSWAKLAKQASNLKVNFFFERVMKYERLV
RILLQEIPVRSVSLRSCYFSDPDWSMRPTLTDLLPTFRYTLQKLTFEFNNNHESLDEELH
LLILSCRKLFYFKIWAFLDVRFVERILKSQEEGQCSLRTLKVRIYTNRYETNEEDRTLRE
IYRRYRKLIDSELNYFVIAYPMM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaggcgacctgatccagcctcaagatcagagctgctgggccaccctgcca
gatgtgtgcctgcgtcgtgttttctggtggctgggagacagggaccggtccagggcagcc
ctggtctgcaggaaatggaaccagatgatgtcttcggctgatctctggcgccatcggacc
atcaccttcagtggaagaccttccagggcacatgcatcagagtttgagtccgctctgtgg
tatgtgaagaaatttggtcgttacctggaacatctggagatcaagtttctgaatccatac
aatgctgtcttaaccaaaaagttccagatcaccatgcgaggcttgctcgcatgcctgggc
aagagtaacagccgcctgaagtctctctccatccagcacctggagatggaccgtctggtc
tggaggaacagtatcaggaactccctcatcaagagcttgagcttcttcctcaagaagatg
ggcaagcatctggatcagctcagcctgaagggagccaggctgacggtggagcaaggctgt
ggggtcctcacctccctgagctacctgaagaacgccagcatggcctcggagctcaacatc
gaagatttcttcagccaccatctagctgtctacagcagcccccagttccacaagaccatg
aacacgttccacaacctcacatccctgacgctgaactacaactgtatctctgacgagctg
ctggagagcctcggtgagaacaatgccagcacgctcggcaccatgaacataaaatgccac
attcatgacccccatgggcaggtggtctggggcatgtcctgggccaagctggcaaagcag
gccagcaacctgaaagtgaacttcttctttgaacgggtcatgaaatatgagcgtttggtt
cggattctcctgcaagagatcccagtgaggagcgtcagcctccgaagctgctacttcagt
gatccggactggtctatgcggcccacgctcaccgacctcctgcccaccttccggtacact
ctgcagaaattaacttttgagttcaacaataaccacgagtcacttgatgaggagctacac
ctcctcatcctgtcctgcagaaagcttttctacttcaaaatctgggctttcctggatgtc
aggtttgtggagcggatcctgaaaagccaggaggaggggcagtgttccttgcgcacgctt
aaggtgagaatatatactaacagatatgagacaaatgaagaggacaggaccctgcgggaa
atttacaggaggtacagaaagctgattgattcagagctgaactattttgtcatcgcctat
cccatgatgtag
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