Perognathus longimembris pacificus (Pacific pocket mouse): 125366171
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Entry
125366171 CDS
T08928
Symbol
Thra
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
plop04081
Hormone signaling
plop04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125366171 (Thra)
04081 Hormone signaling
125366171 (Thra)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125366171 (Thra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125366171 (Thra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125366171 (Thra)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125366171 (Thra)
Nuclear receptors [BR:
plop03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
125366171 (Thra)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125366171
NCBI-ProteinID:
XP_048222621
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Position
17:37531755..37554686
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AA seq
410 aa
AA seq
DB search
MEQKPSKVECGSDPEENSARSPDGKRKRKNGQCSLKTSMSGYIPSYLDKDEQCVVCGDKA
TGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGM
AMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHVATEAHRSTNA
QGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFS
ELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIF
ELGKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNI
PHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagccaagcaaggtggagtgtgggtcagacccagaggagaacagtgccagg
tcaccagatggaaagcgaaaaagaaagaacggccaatgttccctgaaaaccagcatgtca
gggtatatccctagttacctggacaaagacgagcagtgtgtcgtgtgtggggacaaggca
accggttatcactaccgctgtatcacttgtgagggctgcaagggcttctttcgccgcaca
atccagaagaaccttcatcccacctattcctgcaaatatgacagctgctgtgtcattgac
aagatcactcgcaatcagtgccagctgtgccgcttcaagaagtgcatcgccgtgggcatg
gccatggacttggttctagatgactcgaagcgagtggccaagcgcaaactgattgagcag
aaccgggagcggcggcggaaagaagagatgatccggtcattgcagcagcgaccagagccc
actcctgaggagtgggatctgatccacgttgccacagaggcccatcgcagcaccaatgcc
cagggcagccattggaagcagaggcggaaattcctgcccgatgacattggccagtcaccc
atagtctccatgccggatggagacaaggtggacctagaggccttcagtgagtttaccaag
atcatcaccccggccatcacccgtgtggtggactttgccaaaaaactgcccatgttctcc
gagctgccttgcgaagaccagatcatcctcctgaaggggtgctgcatggagatcatgtcc
ctgcgggcagccgtccgctatgaccccgagagtgataccctgacactgagtggggagatg
gccgtgaagcgggagcagctcaagaatggtggcctgggcgtagtctctgatgccatcttt
gaactgggcaagtcactctctgcctttaacctggatgacacggaagtggctctgctgcag
gctgtgctgctaatgtcaacagatcgctcgggcctgctgtgtgtggacaagatcgagaag
agtcaggaggcgtacctgctggcgttcgagcactacgtgaaccaccgcaaacacaacatt
ccgcacttctggcccaagctgctgatgaaggtgactgacctccgcatgatcggggcctgc
cacgccagccgcttcctccacatgaaagtcgagtgccccaccgaactcttccccccactc
ttcctcgaggtctttgaggatcaggaagtctaa
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