Perognathus longimembris pacificus (Pacific pocket mouse): 125366181
Help
Entry
125366181 CDS
T08928
Symbol
Ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125366181 (Ppfibp1)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125366181 (Ppfibp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PUMA_CC
DUF3450
Motif
Other DBs
NCBI-GeneID:
125366181
NCBI-ProteinID:
XP_048222635
LinkDB
All DBs
Position
1:64910256..65031093
Genome browser
AA seq
1002 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGLFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMESDEKEGLRCQVPDSTAETLVEWLQSQMTNGHIHRNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLK
LKLTAMEKDRLDYEDRFRDTEELMQEISDLRNKVSEMDTERLQYEKKLKLTKEELASLKE
QLEEKESEVQRLQEKLMCKLKGEGIEIIDRDENFKQKFKEKNIEVQKLKKAMESLMAANE
EKDRKIEDLRQCLNKYKKMQDTVAFVQGKIGKDGEYEDLQLNSSSISTLMDTQGFSDLEK
SPSSTPRMGSPSHEPLNTSASEELQTSILQVSVPSLLPANVDVETAEYSKSRPKQETSLQ
EKDEKAVLGAAVEIELYDSLSTSNLQKSSSLGNLKKEISDGEKESTQKPSEEKAPGEGRT
CGTLPPKVPSMDDNPFGTRKARSSFGRGFFKIKSNKRTASAPNLDRERSASAPTLAETEK
EAVEHLDLAGASSRPRDSQGTSPFLLSPPSPYSRKKSRGIMRLFGKLKRSQSTTFNPDDM
SEPEFKRGGTRATAGPRLGWSRDLGQSNSNLDMPFAKWTKEQVCNWLVEQGLGSYLNPGK
HWITSGQTLLQASPQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLD
DIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCL
RRRPSDENSISPLEVQQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETM
AQLLNIPPNKTLLRRHLATHFNLLIGSEAQHQKRDAMELPDYVLLTATAKVKPKKLTFSN
FGNLRKKKQEDGEEYVCPMELGQASGSTSDQACKPGLDLCLYDEDDLDRLEQMEDSEGTV
RQIGAFSEGINNLTHMLKEDDMFKDFTARSPSASITDEDSNV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgatatgttggccgcggcgttggagcagatggatggtattata
gcaggttctaaggccctggaatattccaatgggctttttgattgccagtctcccacatct
ccgttcatgggaagtttgcgagccctgcacctagtggaagatctacgaggactgttagag
atgatggaatcagatgagaaggaaggcttgcgatgccaggtcccagattccacagcagaa
accctggtagaatggctgcagagtcagatgacaaatggacacatacataggaatggcgat
gtgtaccaagaaaggctagcccgcttagaaaatgacaaagaatccctcgttcttcaggtc
agtgtgctgacagaccaggtggaggcccaaggagagaagattcgagacttggagttttgt
cttgaagaacaccgagagaagctgaatgccactgaagaaatgctgcagcaggagcttctt
agtcggacatccttggagactcagaagttggatctgatggctgaaatatctaacttgaag
ttaaaactgacagcaatggagaaggacagactggattatgaagacaggttcagagacaca
gaggagctgatgcaggagatcagtgatttgaggaacaaagtcagtgaaatggatactgaa
cgacttcaatatgagaaaaagcttaagttgaccaaagaagaactggcatctttaaaagag
caactggaagaaaaagaatctgaagtacaaagactgcaagaaaaattgatgtgcaagctc
aaaggagaaggaattgaaattattgacagagatgaaaattttaaacagaagttcaaagaa
aaaaatattgaagtacaaaaattgaaaaaggccatggagtctctgatggcagcaaatgaa
gaaaaggatagaaaaatagaagatctcagacagtgcctaaacaagtataagaaaatgcaa
gacacagtggcattcgtccaaggtaaaataggtaaagatggcgaatatgaagatctgcaa
ctcaactccagctccatctccaccttgatggacacccagggctttagtgatctggagaag
agtccttcatccactccaagaatggggtctcccagtcatgagccactcaacacaagtgct
tcagaagagctccaaaccagcatattgcaagtttcagtcccttcattattgccagcaaat
gtggatgtggaaactgctgaatattcaaagtcacgtcccaaacaagaaacttcattgcaa
gagaaggatgaaaaagcagtccttggtgctgctgttgaaattgagctgtatgatagcctt
tcaacttcaaatctgcaaaaatccagcagcctggggaacctgaagaaagagatatcagat
ggggaaaaggagtctactcagaagccttcagaggagaaagctccaggagaaggccgtaca
tgtgggaccctccctcccaaagttccctccatggatgacaacccctttggcactcgaaaa
gcaagatcttcttttggccgaggctttttcaaaatcaaaagtaacaagaggacggcaagt
gctcccaacctggatcgtgaacgtagtgccagtgcacctaccttagctgaaacagaaaag
gaggcagtagagcacttagatttggctggtgcgtcttctcggcccagagattcacaggga
accagccccttcctgctgtcgccaccttctccatattccaggaagaaatcccgagggatc
atgagactttttggaaaacttaagagaagccaatcaactaccttcaacccagatgacatg
tctgagcctgagttcaaaagaggagggacccgggcgactgcaggcccccgacttgggtgg
tctcgagatttgggacagtccaacagtaacttggatatgccatttgccaagtggaccaaa
gaacaagtttgtaactggctggtagaacaaggcctggggtcttatctgaatcctggcaag
cactggatcacatctggccaaacccttctgcaggcttccccgcaggatctggagaaggaa
cttggaattaagcattcacttcataggaagaaactgcaactggctttgcaagccctaggt
tctgaagaagaaacaaaccatggaaagctggatttcaactgggttactagatggctcgat
gatattggccttccccagtacaagacccagtttgatgaaggacgtgtggacggccggatg
ctacattacatgactgttgatgacttactgtctttgaaagttgtgagtgtcctgcaccat
ctcagtatcaagcgggcaatccaggtcttgaggatcaataactttgagccaaactgtctc
cggaggcggccttctgatgagaatagcatctcccctctggaagtgcagcagtggactaat
caccgagtgatggaatggctgcgttctgtggacttggcagagtacgcccccaacctcagg
ggcagtggtgtgcatggcggtctcatggttcttgaaccccgcttcaatgtggaaactatg
gctcagttactgaacatccctcccaataagaccttgttgcgcagacatctagccactcac
ttcaacctcctaattggctcagaggctcagcaccagaagcgagacgccatggagttgcca
gattacgtacttttgaccgccaccgccaaagtgaagccaaaaaaactgaccttcagcaat
tttggcaatctgagaaagaagaagcaggaagatggagaagaatatgtttgtccaatggag
ctgggacaggcatcgggtagtacctctgaccaggcctgtaaacctggactggacctgtgc
ttgtacgacgaggatgatttagaccggctagaacagatggaagattctgaagggacagta
agacagattggtgcattctctgaaggcatcaacaatctcacacatatgctgaaggaagat
gacatgtttaaggacttcactgcccgctcccctagtgccagcattactgatgaagactcc
aatgtctga
DBGET
integrated database retrieval system
