Perognathus longimembris pacificus (Pacific pocket mouse): 125366263
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Entry
125366263 CDS
T08928
Symbol
Krt40
Name
(RefSeq) keratin, type I cytoskeletal 40
KO
K07604
type I keratin, acidic
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04915
Estrogen signaling pathway
plop05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
125366263 (Krt40)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
125366263 (Krt40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125366263 (Krt40)
04147 Exosome [BR:
plop04147
]
125366263 (Krt40)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
125366263 (Krt40)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
125366263 (Krt40)
Exosomal proteins of other body fluids (saliva and urine)
125366263 (Krt40)
Exosomal proteins of colorectal cancer cells
125366263 (Krt40)
Exosomal proteins of melanoma cells
125366263 (Krt40)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
AbiTii
UPF0242
UPF0184
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
125366263
NCBI-ProteinID:
XP_048222807
LinkDB
All DBs
Position
17:complement(38233530..38238970)
Genome browser
AA seq
388 aa
AA seq
DB search
MTLEGVPQGCSAECYVQAAPGTHPSSRCQTPNFLCRSHLTSGCLTPSYYTGSGCHSPCLV
GSCAWCEEGTFNSNEKETMQFLNDRLASYLEKVHSLEEANEELECRIREQCEPEAPALCP
DYQCYFNTIEELQQKILCTKAENSRLAVQLDNCKLAADDFRSKYESELSLHQLVESDISG
LRGILSELTLCKSDLEAHVESLKDDLLCLKKSHEEEVNVLREQLGDRLSVELDTAPTMDL
NKVLEEMRCQYETVLANNRRDAEEWFAAQTEELNQQQLSSAEQLQGCQTEMLEMKRTANT
LEIELQAQQNLMESLECTVAETEAQYSTQLAQMQCLIDNVENQLAEIRCDLERQNQEYEV
LLDTKARLECEINTYRGLLDSEDSRQVP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgactttggaaggtgtcccccagggctgctctgcagagtgctatgtccaggctgcccct
ggcacccatccttcatcccgatgtcagaccccgaacttcctctgcaggtctcacttgacc
tccgggtgcctgacacccagctactacaccggaagtggttgccacagcccctgcctggta
gggagctgtgcttggtgtgaggaggggacgttcaacagcaatgaaaaggaaaccatgcag
ttcctaaatgacagactggccagctacctggagaaggtgcacagcctggaggaggccaat
gaggagctggagtgcaggatccgcgagcagtgcgagcccgaggccccggccttgtgcccg
gattaccagtgctacttcaacaccatcgaagagctccagcaaaagatcttatgcacgaag
gcagagaattctagactcgctgttcagcttgacaactgcaaactcgcagctgatgacttt
aggtcaaagtacgagagcgagttgtcccttcaccagctggtggagtcagacatcagtggc
ctccgtgggatcctgagtgagctgaccctgtgcaaatctgacctggaggcccatgtggag
tctctgaaggacgatctcctctgccttaagaagagccacgaagaggaggtcaatgtgctt
cgtgagcagcttggagaccgactcagcgtggagctggacacagcccccaccatggacctc
aacaaggtcctggaggagatgcgatgtcagtacgaaacggtgctggccaacaaccgcagg
gatgcggaagaatggtttgctgctcagacagaagagctgaaccagcagcagttatccagt
gccgagcagcttcaaggctgccagacagagatgctggagatgaagcgtacagccaacacc
ctggaaattgagctccaggcacagcaaaacctgatggaatctctggaatgtacagtagca
gaaaccgaggcccaatacagcacccagttggcccagatgcaatgcctgattgacaacgtg
gagaaccagctggctgagatccgctgtgacctggagaggcagaaccaggaatacgaggtg
ctgctggacacaaaagcccgactcgagtgtgagatcaacacgtaccgaggcctgctggac
agcgaggacagcaggcaagttccatga
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