Perognathus longimembris pacificus (Pacific pocket mouse): 125366273
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Entry
125366273 CDS
T08928
Symbol
Hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
plop04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125366273 (Hcrt)
04081 Hormone signaling
125366273 (Hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
plop04052
]
125366273 (Hcrt)
Cytokines and neuropeptides [BR:
plop04052
]
Neuropeptides
GPCR binding
125366273 (Hcrt)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
125366273
NCBI-ProteinID:
XP_048222819
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All DBs
Position
17:complement(39234048..39235475)
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AA seq
132 aa
AA seq
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MKLPSAKVSWAAVTLLLLLLLPPALLSPGAAAQPLPDCCRQKTCSCRLYELLHGAGNHAA
GILTLGKRRPGPPGLQGRLQRLLQASGNHAAGILTMGRRRRAGAEPPARPCAGPACPAAA
GAAAVPAARPGI
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttccttccgcaaaggtctcctgggcggctgtgacgctcctgctgctgctgctg
ctgccgccggcgctcctgtcccccggggcggccgcacagcctctgccggattgctgtcgc
cagaagacgtgctcctgccgcctgtacgagctgctgcacggggcgggcaatcacgccgcc
ggcatcctcacgctgggcaagcggaggccgggccccccgggcctgcagggccggctgcag
cgcctcctgcaggccagcggcaaccacgccgcgggcatcctgaccatgggccgccgccgc
cgcgcaggcgcagagccccccgcgcggccctgcgccggcccagcctgtcccgcggctgca
ggcgctgcagcggtgccggcggcccggcccggcatctga
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