Perognathus longimembris pacificus (Pacific pocket mouse): 125366309
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Entry
125366309 CDS
T08928
Symbol
Tmc8
Name
(RefSeq) transmembrane channel-like protein 8
KO
K21988
transmembrane channel-like protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125366309 (Tmc8)
03037 Cilium and associated proteins [BR:
plop03037
]
125366309 (Tmc8)
Transporters [BR:
plop02000
]
Other transporters
Pores ion channels [TC:
1
]
125366309 (Tmc8)
Cilium and associated proteins [BR:
plop03037
]
Other cilia and associated proteins
Stereociliary proteins
125366309 (Tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF4423_like
Motif
Other DBs
NCBI-GeneID:
125366309
NCBI-ProteinID:
XP_048222852
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All DBs
Position
17:53727204..53735055
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AA seq
699 aa
AA seq
DB search
MWQQGSARVEDTPGNPEPGRAGEALWAQELERLCASRAPLRTLPYAMVDRRLVRKLREPE
GARGLVLAEVAARAAGVRTAPGGGGAAAVPGLRALGGGALRDRGPLWHRHPVLFHFPSLP
AAAQPAHHAAPRLPRAAAPGLAPPPAPGPALDLTALQCPDSREPHSAIPKFHHQFWNVLT
GRAFSNTYLFYGAYRAGPESRSGYSLRLAYLLSPLACLLLCFCRTLRRMVKGLPQRLLLG
QDYRAPLSAKLFSSWDFCIRGREAAAIKTHEISNELKVELDEDRRFLLSQQQSRAQRACH
LLSYLRVNVLIFLLVAGAISAIFWATKYSQDNKEESVFVVLQYLPPGVIALVNFLGPQLF
VILVQLENYAPSTEVNLTLFWCVVLKLASLGMFSFSLGQTVLCIGRDGSSCEPYGYNACD
YQCWENSVGEELYKLITFNFLLTVAFAFLVSLPRRLLVERLSGRFWTWLDREEFLVPKNV
LDIVAGQTVTWMGLFYCPLLPLLNSVFLFLTFYIKKYTLLRNCRASPRLFRASSSTFFFQ
LMLLLGLLLAAVPLVYVVSSTHSSWDCGLFTNYSAPWQVVPELVALQLPLPAQQALGYLG
SQAFSFPLLLLLSLVLTVCISQSQANARAIDGLRKQLVWQVREKWHLVEDLSRLLTEPDP
GAPPSRASRPRSICPGFPCPGSPGPSSPLPGPPRAPPPR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagcaggggtccgcgcgagtggaggacacccccgggaaccccgagcccgggcgt
gcgggcgaggcgctgtgggcgcaggagctggagcggctgtgcgcgtcccgcgcgcccctg
cggacgctgccctacgccatggtggaccggcgcctcgtccggaagctgcgggaacccgag
ggcgcgcggggcctcgtgctggcggaggtggcggcgcgggcggcgggcgttcggacggcg
cctggcggaggcggcgcagcggctgtcccggggcttcgggctctgggagggggcgctcta
cgagatcgggggcctctttggcaccggcatccagtcctatttcactttccttcgcttcct
gctgctgctcaacctgctcaccatgctgctccccgcctgcctcgtgctgctgcccctggc
ctggctccacccccggccccaggccccgccctggacctcacagccctccagtgccccgac
agccgggagccacacagtgccattcccaagttccaccatcaattctggaatgtcttaact
ggcagggctttcagcaacacctacctcttctatggggcctaccgggcagggcccgagagc
cgctctgggtacagcctccgcctggcctacctgctcagcccgctggcctgcctgctcctg
tgcttctgcaggactctgcgtcggatggtgaaggggctgccgcagaggctgctcctgggc
caggactacagggcgccgctgagcgccaagctcttctcctcctgggacttctgcatccgg
ggccgagaggcggccgccatcaagacccacgagatcagcaacgagctcaaggtggagctg
gacgaagatcgccgcttcctgctgagccagcagcagtcccgcgcccaaagggcctgccat
ctgctctcctacctgcgggtcaacgtcctcatctttctcctggtggccggggccattagc
gccatcttctgggccaccaagtactcacaggacaacaaggaggagtccgtgtttgtggtg
ctccagtacctgccccctggagtcatcgccctggtcaacttcctgggcccccagctgttt
gtgatcctggtccagctggagaactacgctccaagcaccgaggtcaacctcaccttgttc
tggtgcgtggtgctgaagctggccagcctggggatgttctccttctccctgggtcagact
gtgctgtgcattggcagagacgggagcagctgcgagccctacggttacaacgcctgtgac
taccagtgctgggagaactcggtgggcgaggagctgtacaagctgatcaccttcaacttc
ctcctcaccgtggccttcgccttcctggtcagcctgcctcggaggctgctggtggagcgg
ctctccggccgcttctggacctggctggaccgggaggagttcctggtgcccaagaacgtg
ctggacattgtggctggccagacggtcacgtggatgggcctcttctactgccccctgctg
cccctcctcaacagcgtcttcctcttcctcaccttctacatcaagaagtacaccctcctg
aggaactgcagggcgtccccccggctcttccgcgcctccagctccaccttcttcttccag
ctgatgctcctcctgggcctgctgctggccgcagtgcccctggtctacgtggtcagcagc
actcactcttcctgggactgcggcctcttcaccaactactcggccccctggcaggtggtc
ccagagctggtggccctccagctgccgctccccgcccagcaagccctcggctacctcggc
tcccaagccttcagcttcccgctgctcctgctgctcagcctggtcctgaccgtgtgcatc
tcccagtcccaggccaacgccagggccatcgatgggctccggaagcagctggtttggcaa
gtccgggagaagtggcacctggtggaggacctgtcgcggctgctgacggagccggacccc
ggagcccctccctcccgagcctcgcggccgcggtccatctgccccgggttcccgtgcccg
ggctccccgggccccagcagccccctgcccggccctccccgggcccccccacctcgctga
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