Perognathus longimembris pacificus (Pacific pocket mouse): 125366340
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Entry
125366340 CDS
T08928
Symbol
Caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125366340 (Caprin2)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125366340 (Caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
125366340
NCBI-ProteinID:
XP_048222895
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All DBs
Position
1:complement(66462041..66515710)
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AA seq
1053 aa
AA seq
DB search
MVRLSSSPCSYQSPSGHSEEGRYRNMKSAKPQVNHSQPGESQQASLVSAASPSQAYETYI
DNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNSDQLEAVEKYEEVLHNLEFAKELQK
TFAGLSQELLKAQKKAQRREQMLKLEAEKKKLRTILQVQYVLQNLTQEHVQNDLKGGLNG
AVYLPSKELDYLIKFSKLTCPERNENLSVEDQMEQSSLCFWDLVEGSEKAVVGTTYKHLK
DLLSQLLNSGYFESIPVPQNPKEKEESLEEDMLIQSKKKKQLLKTESMNESECLMELAEP
AIQPQEFLNRRYVTEIDYLNKHDEERSWEADFAKKPNLPKCWDTLSQPDVQEKKQESLKS
WESPVKHQISLEQRKQEIPKLRSTLQEGQKQQQEISQPKPLPSQWKQETPNSKAGHPEEE
QKLETPKLWVTPLQKEQEPKKQIPKSWTSPPQSEQCVSKSWTTPISKEQYSKQPGTLKSW
EDSVESQKHSVTPQSPHSPQPWGAATAGLPNDQLLSRKFNTEPKNVPKPVPQPVGSSSAL
PKDPILRKEKLQDLMTQIQGTCNFMQESVLDFDKPSSAISSQPPAAPPGSPLASTEQNVS
SPSDFLQEPLQATSSPVTCGSDAGLVKTNQTSSESEADFITSQTTKAAVPSSKPPSCLVS
PNPSVSKGSEQGFQSPPASSSLAMNTAPFQAMQTVFNVNAPLPPRKELKEPPYSPSYNQS
FTSASTQTPPQCQLPSIHVEPTVLSQDAASSHHPDGAIQVSNGSLAFYPAQTSVVPRPTQ
PFISSRGTVRGCPRGGRLLTNSFRCPGGYKGFDSYRGPSSISNGNYNALQLQAREYTGAP
YSQMDNFQQCYKQGGASGGPRANSRAGWSDSSQVSSPEHDDTFHSGDSGQGDSRSMTPVE
VPVTSPAATILPVHVYPLPQQMRVAFSAARTSNLAPGSLDQPIVFDLLLNNLGETFDLQL
GRFTCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQL
LQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgactctcttcatccccttgtagttaccagtcaccttcaggccattcagaggag
ggaagataccggaatatgaagtcagccaagccccaagtgaatcacagtcagcctggggaa
agccagcaggcttcccttgtttctgctgcatctccttcccaggcatatgagacctatatt
gataatggactcatatgtcttaaacacaaaattaggaacatcgagaaaaagaagctcaaa
ctggaagattacaaggatcgcctaaaaaatggagagcaacttaactcagaccagttggaa
gcagtagaaaaatatgaagaagtgctacataatttggaatttgcaaaggagcttcagaaa
acctttgctggactgagccaagaactactgaaagcacagaaaaaggcccagagaagggaa
caaatgctaaaacttgaggctgagaagaaaaaacttcgaactatactccaagttcaatat
gtattgcagaacttgacacaggaacatgtgcaaaatgacttaaaagggggcttgaacggt
gcagtgtatttgccttcaaaagaacttgactacctcattaagttttcaaaactgacctgc
cctgaacgaaatgaaaatctgagtgttgaagaccagatggagcagtcatccttgtgcttt
tgggaccttgtggaaggtagtgagaaagcagtggttggaacaacatacaaacacttgaaa
gatctactgtctcagttgctcaactcaggttattttgaaagcatcccagttccccagaat
cctaaggaaaaagaagaatcattggaggaagatatgctaatacagtcaaaaaagaaaaaa
caattattgaagactgaatctatgaatgagtcagagtgtcttatggagcttgcagagcca
gcgatacaaccacaggagtttctgaacagacgctatgtaacagaaatagattatttgaac
aaacatgatgaggagcgatcttgggaagcagattttgccaaaaaaccaaatctccctaaa
tgttgggatacacttagtcaaccagatgttcaagagaagaaacaggaatccttaaagtcc
tgggagtctcctgtgaagcaccagatttccttagaacagaggaaacaagagattcccaaa
ctcaggtcaactctgcaggaaggacagaagcagcagcaagagatctcccagcccaaacca
cttcctagccagtggaagcaagaaaccccaaactccaaagcaggacaccccgaagaagag
cagaagctagagacaccaaagctttgggtcactccactgcagaaagaacaagagccaaag
aaacagattccaaagtcctggacatcccctccccagagtgaacagtgtgtcagcaagtcg
tggactactcctataagcaaagagcagtactcaaaacagccagggactctcaaatcctgg
gaagacagtgttgagagtcaaaaacactccgttacaccacagtcaccacattctccacag
ccctggggagcagccaccgcaggcctaccaaatgaccagctcctgtctagaaagtttaat
acagaacccaaaaatgtgcctaagccagtgcctcagcctgtaggttcttcctctgccctt
ccaaaggatccaatattgaggaaagaaaaactgcaggatctgatgactcagattcaagga
acttgtaactttatgcaagagtctgttctggactttgacaaaccatcaagtgcaatttca
tcccagccgccagcagctccgccaggtagcccattagcatctacagaacaaaatgtgtcc
agtccaagtgattttcttcaggagccattacaggctacttcttctccagttacttgtggt
tcagatgctggcttggtgaagactaatcagacttcatcagaatctgaagcggattttata
acctcacagactactaaggctgcagttccctcaagcaaacctccatcttgcctggtgtcc
cccaacccttctgtgtcaaagggctctgaacagggcttccagtcacctccagcaagtagt
tcactagccatgaacacagctccctttcaagccatgcagacagtatttaatgtgaatgcg
cctttacctcctcgtaaagaactaaaagaacctccttattcacctagctacaatcagagt
tttacttcagccagtacacagacaccaccccagtgccaactgccatctattcatgtagaa
ccaactgtcttgtctcaggatgctgcttcaagtcaccaccctgatggagctattcaagta
agcaatgggagccttgccttttacccagcgcagacaagtgtagtccctagacctactcag
ccattcatcagtagccggggaactgtgagaggatgtcctcgtggcgggagactgctcact
aattccttccggtgtcctggtggttataaaggttttgatagttatagaggaccttcttca
atttccaatggaaattataatgccctgcagttgcaagctagagaatatactggagcacct
tattctcaaatggataatttccagcagtgttataaacaaggaggggcatctggtggtcct
cgagcaaattcaagagcagggtggagtgactcctcgcaggtgagcagcccagagcacgat
gatacctttcacagcggtgactctggacaaggagactctcgcagcatgacccccgtagaa
gtgccggtgacaagcccagcggccaccatcctgcctgtgcatgtctatcccctgcctcag
cagatgcgtgttgccttctcggcagccagaacctccaacctggcccctgggtctctggac
caaccaattgtgtttgatcttctgctgaacaacttgggagagacctttgatcttcagcta
ggtagattcacttgtcccgtgaatggcacttacgtcttcattttccacatgctgaagctg
gctgtgaacgtgcccctgtatgtcaacctcatgaagaacgaggaggtcttggtgtctgcc
tacgccaacgacggtgctccagatcatgagacggctagcaaccatgctattcttcagctc
ctgcagggagaccagatatggctacgcttgcaccggggagccatttatggaagtagctgg
aagtattctactttttcaggctatcttctttatcaagattga
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