Perognathus longimembris pacificus (Pacific pocket mouse): 125366419
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Entry
125366419 CDS
T08928
Symbol
Fgd4
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125366419 (Fgd4)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
125366419 (Fgd4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
PH_6
FYVE_2
RHG20_PH
zf-RING_UBOX
zf-RING_5
IBR
PH_16
zf-HC5HC2H
Mcp5_PH
Motif
Other DBs
NCBI-GeneID:
125366419
NCBI-ProteinID:
XP_048223043
LinkDB
All DBs
Position
1:67277126..67471257
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AA seq
903 aa
AA seq
DB search
MSDEGGSNFRRVAIRRRKSNLVYLPPGTPRPWGRPLSHFGRAEVAPLRGPTSADASGSST
CPKVSVVLPCSTSSTTTLVDSKVSEEAQGINGKTPANRSAACPKPQVPPKPLHLQNSPSS
KIHPTPRHKALPSAKPRMEEVKPASAPCMSKEKSSKVSDLISRFEGGSTLSNSSDLKKDP
AVNLNAPRTPGRPGLTPTSPAKLLTQHPPQKQGNDPSLTQGEQTCMANGIMAALNQTECD
EEQATSPSPTAPSQAAEPLQETHLINGEINEMATNAATLTTHDHDGDVSHSSCRTPSTDA
VLPLNKGQEDTKDKKQDRDNGTSPLEPEQLDQHLEMKETNEQKRHKIANELLLTERAYVN
RLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTP
RIGDILQKLAPFLKMYGEYVKGFDNAMELIKTMTERVPQFKSVIEDIQKQKVCGSLTLQH
HMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKL
LEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGS
KFTVRTRVGIDGMNIVETQNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAF
HQRNETFRNAIAKDNDIHSEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCR
ACGHVVCWKCSDYKAQLEYDGGKLNKVCKDCYQILSGFTDSEEKKRKGILEIESAEVSGN
SVVCSFLQYMEKSKPWQKVWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYIVDDVPRSA
DLPHSFKLTQSKSAHSFAADTEDLRQKWLKIILMAVTGETPERAQEHFVTIEEQTDLKSK
SES
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgagggcggctccaacttcaggcgggtggcgatccgacgaagaaagtccaac
ctcgtctacctgccacccgggaccccccggccctggggccggccgctgtcgcacttcgga
agggccgaggtcgcccccttgaggggcccgacgtccgcggacgcgtccggcagcagtacc
tgtccaaaggtcagtgtagttctaccttgttcaacaagcagcacaaccacactggttgat
tcgaaagtatctgaagaggctcagggaataaatgggaagacaccagcgaatcgctcagct
gcatgtccaaagccgcaagtgcctccaaagcccttacatctgcagaattcaccttcatcc
aaaatacacccaactcccaggcataaagctttacctagtgcaaaacccaggatggaggaa
gttaaacctgcctctgcaccttgtatgtcgaaagaaaaatccagtaaggtttcagatctc
atcagtcgctttgaaggaggcagcacattatcaaattccagtgatctgaaaaaagatcct
gcggtgaacctaaatgctcctcgaaccccaggacggcctggcttgacacccacttctcca
gcaaagctcctcacccagcacccaccacagaaacagggaaatgatcccagtctgactcag
ggcgaacagacttgtatggccaatggcataatggcggcactaaaccagacagaatgtgat
gaggaacaagcgacctctcccagccccactgcaccttcgcaagctgctgaacccctgcag
gaaactcacctcatcaatggagaaataaatgaaatggccaccaatgctgcaaccctcaca
acccatgaccatgacggagatgtttcccatagtagctgcaggaccccaagcacagacgcg
gtgcttcccctaaacaaaggacaggaggacacaaaggacaagaagcaagacagggacaat
ggtacaagccccttggaaccagagcaactggaccagcaccttgagatgaaggaaactaat
gagcaaaaacgtcacaaaatagccaatgaacttttgctgacagaaagagcttatgtgaat
cgactggacctattagatcaggtattttattgcaagttattggaagaagcaaacagaggc
tcattccccgcagagatggttaataaaatcttttctaacatttcatcaataaatgccttc
catagtaaattcctcttgccagagctggagaaacgaatgcaagaatgggaaaccactcct
agaattggagacatccttcaaaaattagcaccattcctaaagatgtatggagaatacgtg
aaaggatttgacaatgcaatggagctgattaagactatgacagagcgtgttccccagttc
aaatcagtgattgaagacattcagaaacagaaggtctgtgggagcttaactttacaacat
cacatgctggaacctgttcagcggattccacggtatgagatgcttcttaaggactaccta
agaaaattgcctcctgactctccagactggaacgatgcaaaaaaatcacttgaaattatt
tctacagcagcaagccattctaatagcgcaataagaaaaatggagaacttgaagaaactc
ttggagatatatgaaatgttaggagaagaagaagacattgtaaatccttccaatgaatta
ataaaagaaggacagatcctcaaactcgctgcccggaacacctcagcacaagaacgctac
ctattcctattcaacaacatgttgctatactgtgtacccagattcagcttggtgggctca
aaattcacagttcggaccagagttggcattgatgggatgaatattgtagagacacagaac
gaagagtatccccatactttccaggtgtctgggaaagagaggacgctggaactgcaggcc
agttctgaacaagacaaagaagaatggatcaaggcccttcaagagactattgatgctttt
catcagaggaatgaaactttcagaaatgcaattgcaaaggataatgacattcactcagag
gtttctactgctgaattaggaaaaagagctccaagatggattcgagataatgaagtgact
atgtgcatgaaatgcaaagagcccttcaatgccctgaccaggaggaggcaccactgtcgg
gcttgtggacatgtggtttgttggaaatgttcagactacaaagctcaacttgagtatgat
ggtggaaaattgaacaaagtctgcaaagactgttatcaaatactaagtggattcaccgac
agtgaagaaaaaaaaaggaaaggaattttagagattgagtccgcagaagtgtctggaaac
agtgtggtgtgcagcttccttcagtacatggaaaagtcaaaaccttggcagaaagtttgg
tgtgtgatccccaagcaagaccccctcgtgctgtacatgtatggcgccccacaggatgtc
agagcacaggccaccattccccttctgggctacatcgtggatgatgtaccccggagtgca
gatcttccccacagcttcaaactgacccagtctaagtccgcacacagcttcgcagctgac
actgaggacctgagacagaaatggctgaaaatcatcctcatggctgtcacaggtgagacc
ccagagcgggcccaggagcactttgtcaccatagaagagcaaaccgacctgaagagcaaa
tctgagtcctga
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