Perognathus longimembris pacificus (Pacific pocket mouse): 125366436
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Entry
125366436 CDS
T08928
Symbol
Chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125366436 (Chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125366436 (Chrne)
Ion channels [BR:
plop04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125366436 (Chrne)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125366436
NCBI-ProteinID:
XP_048223083
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Position
17:complement(8006541..8012138)
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AA seq
493 aa
AA seq
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MAGMLLSLLLLGLLGTVSGKNEEENLYHHLFDNYDPECRPVKTPEDTVSITLKVTLTNLI
SLNEKEETLTTSVWIGIDWQDYRLNYSKEDFGGIETLRVPSELVWLPEIVLENNIDGQFG
VAYECNVLISEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYNAQEVEFIFA
VDDNGDTIDKIEIDTEAFTENGEWAIDFCPGVIRRHQGDSADSQGETDIMYSLIIRRKPL
FYIINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSV
PLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHASSPRLRHVLLELLPRLLGSGPPSQ
AQGATASPTRRASSVGLLLRAEELILKKPRSELVFEGQRHRHGARAAALCQSLGAAAPEI
RCCVDAVNFVAESTRDQEAAGEEMSDWVRMGKALDNVCFWAALVLFSVGSTFIFLGGYLN
QVPDLPYPPCIQS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccgggatgctgctctccctgcttctcttggggcttcttggtacagtgtcggggaag
aacgaggaggagaacctttaccaccacctcttcgacaactacgaccctgaatgccggcct
gtgaagacgccggaggacacggtgtccatcactctcaaggtcaccctgaccaacctcatc
tcactgaacgagaaggaggagactctcaccaccagtgtctggattggaatcgactggcag
gattaccggctcaactacagcaaggaagacttcgggggcatagaaacgctgcgggtccct
tctgaactcgtatggctgccagagattgtgctggaaaataatatcgatggccagttcggc
gtggcctatgagtgcaatgtgctgatctcggagggaggctacgtgagctggctgcctccg
gccatctaccgcagcacgtgcgccgtggaagtcacctacttccccttcgactggcagaac
tgctcgctcattttccgctctcagacctacaatgcccaagaggtggagttcatatttgct
gtggacgacaacggcgacactatcgacaagattgaaatcgacaccgaggcctttactgag
aacggggaatgggccatcgacttctgccctggggtgatccgccgccaccaaggagactcg
gctgacagccagggggaaactgacatcatgtactcccttatcatccgccggaagccgctc
ttttacatcattaacatcatcgttccttgtgtgctcatttcgggccttgtgctgttggcc
tacttcctgccggcgcaggctggcggccagaagtgcaccgtttctatcaacgtcctgctc
gcccagactgtcttcttgttcctaattgcccagaaaatcccagagacgtctctgagcgtg
ccgctactaggcaggtatctgattttcgtcatggtggtcgctacgctcattgtcatgaat
tgcgtcattgtgctcaacgtctctttgcggacgcccacgactcacgcttcgtccccacgg
ctgcgccacgtgttgctggagctgctgccccggctcctgggctccgggccgccctcccag
gctcagggtgccactgcgtcgcccaccaggcgggcctcgtccgtgggtttactgcttcgc
gcggaggagctgatcttgaagaagccgcggagcgagctggtgtttgaggggcagcgtcac
cggcacggggcccgggctgccgccctctgccagagcctgggcgccgcagcccccgagatc
cggtgctgtgtggacgctgtgaacttcgtggccgagagcacacgggatcaggaggccgca
ggcgaggagatgtctgactgggtgcgcatgggaaaggcgctggacaatgtctgcttctgg
gctgctctggtgctcttcagcgtgggctccaccttcatcttccttgggggctatctcaac
caagtacccgatctcccctacccgccatgcatccaatcttga
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