Perognathus longimembris pacificus (Pacific pocket mouse): 125366711
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Entry
125366711 CDS
T08928
Symbol
Usp6nl
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125366711 (Usp6nl)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125366711 (Usp6nl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
125366711
NCBI-ProteinID:
XP_048223346
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All DBs
Position
18:complement(10324364..10425949)
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AA seq
829 aa
AA seq
DB search
MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPYHN
AAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMK
EETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYN
TEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEK
ILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMS
YTILKLHRKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQISMAELKRAKLDLPEPG
KEDEYPKKPLGQLPPEFHSGSTHHLSNGQRSVGVPSPLVSSRRERGSSPHRKQEHSPHHQ
SRAGTPERVRPLGRKSADADSNNLKDEAAVQRKPSGPQDNSRPYNHAAANQNSNATSNIR
KEFMPKWNKPSDAPAIERTAKFTTEGRSRSVHPALSVPSSAESRVPNTRQKVKALEAGEG
KRGSNASQYDNVPGSESESGAFVEEALERAYSQNPRNAFYSSTPRKHAEPSSSPPKASNK
FTFKVQPAGYGRYPSQLEGDDCGPINPPSYSNPPVYHGHSPKHTPAAASSIVPAQMGPAT
HVNPPWRPYGSTVSTDNSPEKSSTRPTPVVLPSSRIEVLPVDLGAGGYVGNSGSPKNGTF
ILPPVDYLPDNRKWSEVSFTYRPEMHGQSWTRDASHSHLSNLPKYTAFPHVPFQDHGLPP
VSVDGPVRYKTSPAAEDASPAGYQYTGPSPPAYHYRKREGLALQESVLL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggaccaggatgtagcactcaaacttgcccaggaacgagctgaaatagttgct
aaatatgacagaggacgagaaggtgcagagatcgagccttgggaagatgctgactacctc
gtttacaaagtcactgatagatttggctttttacatgaggaggagctcccctatcataat
gcagctgtggaacggcaaaaacatttggaaattgaaagaactaccaaatggctgaaaatg
ttaaagggatgggaaaaatacaagaacactgaaaagtttcatagaagaatttacaaggga
atccctctccagctccggggtgaagtctgggctctcctccttgagatccctaaaatgaaa
gaagaaacaagagacctttatagtaaattaaaacacagagcacggggttgttcacctgat
atcagacaaatagaccttgatgtcaaccgcacatttagggaccatattatgtttagagac
agatacggtgttaagcaacaatccttattccatgttcttgctgcatattctatttataat
acggaagtcggctactgtcaggggatgagccagatcacagctctgctcctcatgtacatg
aatgaggaagatgccttctgggccctggtcaagctcttttcaggccccaaacacgccatg
catggattttttgtccaaggttttcctaaactcttgagatttcaagaacatcatgaaaaa
atactgaataaatttctgtccaaacttaagcaacacttggattcccaagaaatctacaca
agtttttacacaatgaaatggttttttcagtgtttccttgatcgtactccttttacactg
aacctcagaatatgggatatctacatctttgaaggagaacgagtccttactgctatgtct
tacacaatcttaaaattacacagaaaacatctaatgaaattgtctatggaagaacttgta
gaatttcttcaggagactctagcaaaggattttttctttgaagacgattttgtaatcgag
caacttcagatatcaatggcagaactaaagagggcaaaattagatctcccagaacctggt
aaagaggatgaatatccaaagaaacctctgggacagcttccacctgaatttcattctggt
agcactcaccacctgagcaacggacagagaagtgttggtgttcctagtcccctcgtaagc
agcaggcgagagcgcggctcatccccacacaggaagcaggagcactcccctcaccatcag
agccgagccggcacaccagagagagtcaggccgctcgggaggaagtcggcggacgcggat
agtaacaacctgaaagatgaggcagctgtgcaaagaaaaccttcaggtccacaagacaat
tccaggccctataaccatgcagcagctaaccagaatagcaatgccacttcaaatatcagg
aaggaatttatgcccaagtggaacaaaccgtcagatgctccagctatcgaaagaactgcc
aaattcaccacagaaggcagaagtagatcagtacatcccgcgctttcggtcccaagttct
gctgaaagccgagtcccgaacacaaggcaaaaggtgaaggctctggaggctggcgagggg
aagcggggctccaacgcgtcacagtacgacaacgtgcccgggagtgaaagtgagagcggg
gccttcgtggaagaggcgctcgaaagggcttactctcagaatccaaggaatgccttttac
tccagcactccacgaaagcatgctgagccaagctctagtccacccaaagcatccaacaag
tttactttcaaagtgcagcctgcaggctatggaagatacccctcccagttagaaggggat
gactgtgggcccataaaccccccctcttacagcaatccccccgtttaccatggacattct
ccaaaacacacgcccgcggctgccagcagcattgtgcctgcacagatgggccctgccacg
cacgtgaatcctccctggagaccttacggctccactgtttccaccgataattctcctgag
aagtcttccacccgccccactcctgtggtcctgccctctagccgcatagaagtccttcct
gttgaccttggtgctggggggtatgtgggcaactcaggatcaccaaagaatggaacgttc
atccttcctccagtggattatttgccggataacaggaagtggtcagaagtgagttttact
taccggcctgagatgcacggacagtcttggactcgcgatgctagccatagccacttaagc
aatttaccaaaatacacagcctttccacacgtgcccttccaggaccatggcctcccccca
gtgtcagtagatggtcccgtgcgctataaaacctcaccagctgccgaagacgccagtcca
gctgggtatcagtacacagggccctcgcctccagcatatcactacagaaaacgagagggg
cttgcgcttcaagaatcagtattgctgtga
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