Perognathus longimembris pacificus (Pacific pocket mouse): 125366718
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Entry
125366718 CDS
T08928
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125366718 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125366718 (Usp42)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125366718 (Usp42)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125366718 (Usp42)
Ubiquitin system [BR:
plop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125366718 (Usp42)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125366718
NCBI-ProteinID:
XP_048223370
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All DBs
Position
1:complement(68596932..68644448)
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AA seq
1270 aa
AA seq
DB search
MTIVDKAESSGPSTYQNQPGSSEAVSPGDMDTGSASWGAVSSLNDVPNHTLSLGPVPGAV
VYSSSSVPDKSKPSPQKDQVLGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPSGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGEL
THSPHSPGQSSPRPVINQRVVTNKQAAPGFIGPQLPSHMIKNAPHLNGTGPLKDTPSSSM
SSPNGNPSVNRTSPVNASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQPIL
HSNSLEAPTKPVPSSTITNSSAIQSTSNASTMSVSSKVAKSVSPSKSCSQPVVNGKSKLS
SSVLVPYGAESDEESDEESKGLAKENGVVPTLSPFPAAQEAEDGETSQPELLEPVSQNGA
NSADGNLKENGLSFDSASCHVQPALLSENPFSKANGLPGKLMPTLLPSLPEDKILDTFKL
SHKVKGSAGETSPPGAGSSPVEDPAEPEPACISAVAAAPKTPDAPASPSWSAAPPPVDPG
VTSTKEGCPEADPAEPRKDGDRDPDGGRDEDREWGEDEALPGMHAPCGPPGAPRTPPPEA
DRRAESPAAKSGEKPSPSEDGAEPVHWVHLRRDRGEAAEEPPAPDRTAAAPAEGATGRGP
PGDEGSAVSLAPARDKPGGPSGLRRVERGHCRDRSRRDHDDRDPGRDRGRSSSGDRGDHA
RESRGSSAAHGPHRHGRRRSYGREHCAGSPRPPGHGHAGPEPRGPSRYGHHRPRSRSRSG
PEQDWGRHRRAESELARGREDFHPGRLRWDRGYRPRFAPYAARERWAPARPRDCYWARAR
GLHSPPALPERPRDATPPPGPDGCGLPERLHGHENAKARKRRYEGTDANHSHPDKKARRS
FEKDSSSGEPRTAKKHKKSKKKKKSKDKHRERDCRPQQDLELSVSYSDAGLHRHRKKKKK
KKRHSRRPEDFGKDAEPHLAKAVSYDTMGHFRRTEGGVLLTEGPFREKTKHLRMEGRADR
CHLSEYGQGD
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagctgaatcttcaggcccatcaacctatcagaaccagcctggc
agttctgaggctgtctcacctggagacatggatacaggctctgccagctggggtgctgtg
tcttcgttaaatgatgttccaaaccacacactttctttaggaccagtacctggtgctgta
gtttattcaagttcatctgtacctgacaaatcaaagccatcgccacagaaggatcaagtc
ctaggtgatggcattgctcctcctcagaaagtacttttcccatccgagaagatttgtctt
aagtggcaacaaactcatagggttggcgctgggctccagaatttgggtaacacttgtttt
gccaatgcagcactgcagtgtttaacctacacgccacctctcgccaattacatgttatca
cacgagcactccaaaacatgtcatgcagaaggcttttgtatgatgtgcacgatgcaagca
cacattacccaggcgctcagtaatcctggggatgttataaaacccatgtttgtcatcaac
gagatgcgccgtatagctaggcacttccgttttggaaaccaagaagatgcccatgagttc
cttcagtatactgtcgatgctatgcaaaaggcatgcttgaatggcagcaataaattagac
agacatacccaggccactacacttgtttgtcagatatttggaggatatttaagatctaga
gtcaaatgtttaaactgcaaaggcgtttcagatacttttgatccatatcttgatataaca
ttggaaataaaggctgctcagagtgtgaacaaggcattggagcagtttgtgaagccagag
cagctggatggagaaaactcctacaagtgcagcaagtgtaaaaagatggttccagcttca
aagaggttcactatacatagatcctccaatgttcttacactttccctgaaacgctttgca
aatttcaccgggggaaaaattgctaaggatgtgaaatatcctgagtaccttgatattcgg
ccatacatgtctcaacccagtggagaaccaattatttatgttttgtatgcagtgctggtg
cacactggctttaactgccatgctggccactacttctgctacataaaagctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgatattagatcagtactcagc
caacaagcttatgttctcttttatatcaggtcccatgatgtgaaaaatggaggtgaactt
acccattctccccacagccctggccagtcctctccccgccctgtgatcaatcagcgggtt
gttaccaacaagcaggccgcaccagggtttattggaccacagcttccctctcatatgata
aagaatgcacctcacttaaatgggactgggccattgaaggacacaccaagcagttccatg
tcaagtcctaatggaaaccccagtgttaacaggactagtcctgttaatgcttccacttct
gttcaaaactggtcagttaacaggccctcagttattcctgaacaccccaagaaacaaaaa
atcaccatcagtattcacaacaagttgcctgttcgccaaggtcagtctcagcctatcctt
catagcaattctctggaggcccctaccaagcctgttccctcctctaccatcaccaattct
tctgcaatacagtctacctcgaatgcatctacgatgtcagtttctagtaaagtagcaaaa
tcggtttccccgagcaagtcctgctcccagccagtggtgaatggcaagtccaagctgagt
tccagcgtgctggtcccctacggagccgagtccgacgaggagtccgacgaggagtccaag
ggccttgccaaggagaacggcgtggtccccacactgagcccgttccctgctgctcaagaa
gccgaggacggtgagacttctcagccggagttgctggagcctgtctcccaaaatggtgct
aacagtgcagatggcaacctgaaggagaatggcctgtcctttgacagtgccagctgccat
gtgcagcccgctcttctctcagaaaaccccttttccaaagcaaatggtcttcctggaaag
ttgatgcccactcttttgccgtctctcccagaggacaaaattctggacactttcaaactt
agccacaaagtaaaaggctctgcaggtgaaacaagccccccaggagcagggagtagcccc
gtggaggaccctgccgagccggagccggcctgcatcagcgcggtggctgcagcccccaag
acgccagatgcccccgctagcccgagctggtccgcggcaccgccgcccgtggaccccggt
gtcacctccaccaaagaaggctgccccgaggcggacccggccgagccccgcaaggacggg
gaccgagatccggacggtggccgggacgaggacagggaatggggcgaggatgaggccctt
cctggtatgcacgcgccttgcggccccccgggagccccgcgcacgccgcctccggaggcg
gaccggagagccgagagccccgccgccaaatccggggagaagccgagcccctcggaagat
ggggcggagcccgtgcactgggttcacctccgcagggataggggcgaggccgccgaggag
cccccggcaccagacaggaccgcggctgcccctgcggaaggggccacggggcgcgggccc
ccaggggacgagggcagcgcggtgtccctggccccagccagggacaagccgggtggcccg
agcggcctccgaagggtggaacggggccactgccgggaccgcagccgccgggaccacgac
gaccgcgacccgggccgagaccgcggccgctcctccagcggagatcgtggggaccatgcg
cgagagagccggggcagctccgcggcccacgggccccaccgccatgggcggcggcgctcc
tacggccgggaacactgcgccgggagcccgcgcccgcccggccacggccacgccggcccc
gagccccgcggcccgagcaggtacggccaccaccgcccgcggagccggagccgcagcggg
ccagaacaggactgggggcggcaccgccgcgcggagagcgagctggcccggggccgcgag
gacttccaccccgggaggctgcgttgggaccgcggctaccgccccaggttcgcgccctac
gccgcccgcgagcgctgggccccggcccggccccgggactgctactgggcccgcgcccgc
ggcctccactctccgcccgcgctccccgagcgcccccgggacgccacgcctccgcccggg
cccgacggctgcggcctcccggagcgcctccacggacacgagaacgccaaggcccggaag
cggaggtacgagggcaccgacgccaaccacagccacccggacaagaaagcccggagaagc
ttcgagaaggactcgtcgtcgggagagccgaggacggccaagaagcacaaaaagtcaaag
aagaagaagaaatccaaagacaaacaccgagagcgggactgcaggccccagcaggatttg
gagctttccgtgtcatactctgacgctggcctccacagacacagaaagaagaagaagaaa
aagaagaggcactcgaggagaccagaggactttgggaaagatgcagaaccacacctagca
aaggccgtgagctatgacaccatgggccatttccggagaactgaggggggagttttgctc
actgagggccccttccgggagaagacaaagcatctgaggatggagggcagggctgacagg
tgccatctgtccgagtatggccagggtgattga
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