KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125366727
Entry
125366727         CDS       T08928                                 
Symbol
Itgb1
Name
(RefSeq) integrin beta-1
  KO
K05719  integrin beta 1
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03271  Virion - Rotavirus
plop04015  Rap1 signaling pathway
plop04145  Phagosome
plop04151  PI3K-Akt signaling pathway
plop04360  Axon guidance
plop04510  Focal adhesion
plop04512  ECM-receptor interaction
plop04514  Cell adhesion molecules
plop04530  Tight junction
plop04611  Platelet activation
plop04670  Leukocyte transendothelial migration
plop04810  Regulation of actin cytoskeleton
plop04820  Cytoskeleton in muscle cells
plop05100  Bacterial invasion of epithelial cells
plop05133  Pertussis
plop05135  Yersinia infection
plop05140  Leishmaniasis
plop05145  Toxoplasmosis
plop05165  Human papillomavirus infection
plop05200  Pathways in cancer
plop05205  Proteoglycans in cancer
plop05222  Small cell lung cancer
plop05410  Hypertrophic cardiomyopathy
plop05412  Arrhythmogenic right ventricular cardiomyopathy
plop05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    125366727 (Itgb1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    125366727 (Itgb1)
   04151 PI3K-Akt signaling pathway
    125366727 (Itgb1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125366727 (Itgb1)
   04514 Cell adhesion molecules
    125366727 (Itgb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125366727 (Itgb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125366727 (Itgb1)
   04530 Tight junction
    125366727 (Itgb1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125366727 (Itgb1)
   04810 Regulation of actin cytoskeleton
    125366727 (Itgb1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    125366727 (Itgb1)
   04670 Leukocyte transendothelial migration
    125366727 (Itgb1)
  09158 Development and regeneration
   04360 Axon guidance
    125366727 (Itgb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125366727 (Itgb1)
   05205 Proteoglycans in cancer
    125366727 (Itgb1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    125366727 (Itgb1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    125366727 (Itgb1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    125366727 (Itgb1)
   05133 Pertussis
    125366727 (Itgb1)
   05100 Bacterial invasion of epithelial cells
    125366727 (Itgb1)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    125366727 (Itgb1)
   05140 Leishmaniasis
    125366727 (Itgb1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    125366727 (Itgb1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    125366727 (Itgb1)
   05414 Dilated cardiomyopathy
    125366727 (Itgb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:plop04131]
    125366727 (Itgb1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plop04147]
    125366727 (Itgb1)
   04515 Cell adhesion molecules [BR:plop04515]
    125366727 (Itgb1)
   04090 CD molecules [BR:plop04090]
    125366727 (Itgb1)
Membrane trafficking [BR:plop04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    125366727 (Itgb1)
Exosome [BR:plop04147]
 Exosomal proteins
  Proteins found in most exosomes
   125366727 (Itgb1)
Cell adhesion molecules [BR:plop04515]
 Integrins
  Integrin beta subunits
   125366727 (Itgb1)
CD molecules [BR:plop04090]
 Proteins
  125366727 (Itgb1)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 125366727
NCBI-ProteinID: XP_048223372
LinkDB
Position
18:complement(15237804..15292827)
AA seq 804 aa
MNLQLVVWIGLIGSACYVFGQADKNRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
SARCDDLEALKKKGCHPDDIENPRGSKNIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLD
LHLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLNLTDRGEVFNRLVGQQR
ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGR
CHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELRNLIPKSAVGTL
SGNSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISI
GDEVQFEISITANKCPEKVSGNSKNSETIKIKPLGFTEEVEIILHFICECECQNEGIPES
PKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCG
QCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCRCRVCECYPNYTGSACDCSL
DTDPCMAGNGQICNGRGICECGVCKCTDPKFQGQTCETCQTCLGVCAEHKECVQCRAFNK
GEKKDTCAQECSHFNLTKVENRDKLPQPVQVDPMTHCKEKDVDDCWFYFTYSVNGNNEAI
VHVVETPDCPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAK
WDTGENPIYKSAVTTVVNPKYEGK
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgaatttacaattggttgtttggattggactgatcggttcagcttgctatgtgtttggc
caagcagataaaaatagatgtttaaaagcaaatgccaaatcgtgtggagaatgtatacaa
gcagggccaaattgtggatggtgcacaaattcaacatttttacaagaaggaatgcctacc
tctgcacgatgtgatgatttagaagccttaaaaaagaaaggatgccatccagatgatata
gaaaaccccagaggttccaaaaatataaagaaaaataaaaatgtcaccaatcggagcaaa
ggaacagcagagaagctccagccagaagacattacgcagatccagccacagcagttggat
ctgcatttacgatcaggggagccacagacgtttacattaaaattcaagagggctgaagac
taccccattgatctctactaccttatggacctttcttactccatgaaagatgacctggag
aatgtgaaaagtcttggaacagatctgatgaatgaaatgcggaggatcacttcagacttc
cggattggttttggctcatttgtggagaaaactgttatgccttatattagtacaacacca
gcaaagcttaggaatccttgcacaagtgaacagaactgcaccagcccatttagctataaa
aacgtcctcaatctcactgatagaggagaggtattcaacaggcttgttggtcagcagcgc
atatctggaaacttggactctcctgagggtggatttgatgccatcatgcaagttgctgtg
tgtggatccctgattggctggaggaatgtcactcggctgctggtgttttccacggacgct
ggctttcactttgctggcgatgggaaacttggtggcattgttttaccaaacgatggacgg
tgtcatctggaaaataatgtctatacaatgagccattactatgattatccctctattgct
caccttgtccagaaactcagtgaaaataatattcagacaatttttgcagttactgaagaa
tttcaacctgtttacaaggaactaagaaatttgatccctaagtcagcagtgggaacatta
tctggtaattctagcaatgtaattcagttgatcattgatgcctacaattccctttcctca
gaagtcattttggaaaacagcaaattgccagaaggagtaaccataaattacaaatcctac
tgcaagaatggggtgaatggaacaggggaaaatggaagaaagtgctccaatatctccata
ggagatgaggttcaatttgaaataagcataactgcaaataaatgtccagaaaaagtttct
ggaaacagtaagaattctgaaaccattaaaattaagcctctgggctttactgaagaagta
gagattattcttcacttcatttgcgaatgtgaatgccaaaatgaaggcattcctgaaagt
cccaagtgccatgaagggaacggaacatttgagtgtggagcttgtaggtgtaacgagggc
cgcgtgggccggcactgtgaatgtagcacagatgaagttaacagcgaagacatggatgcc
tactgcaggaaagagaacagctcagaaatctgtagtaacaatggagagtgtgtctgtgga
cagtgtgtgtgtcggaagcgagataatacaaatgaaatttattctggcaaattctgcgag
tgtgataatttcaactgtgatagatccaatggcttaatctgtggaggaaatggcgtttgt
aggtgtcgtgtgtgtgagtgctaccctaactacactgggagtgcttgtgactgctctttg
gatactgatccgtgcatggcaggaaatggacaaatctgcaatggccggggcatctgtgag
tgtggtgtctgcaagtgtacagacccgaagtttcaaggtcaaacttgtgagacgtgtcag
acctgcctgggtgtttgtgctgagcataaagaatgtgttcagtgcagagccttcaataaa
ggagagaagaaagacacgtgtgcacaggaatgttcacatttcaatctgaccaaggtagaa
aatcgggacaagttgccccagcctgtccaggttgaccccatgacccactgtaaggagaag
gatgtggacgactgctggttctacttcacctactcggtgaacgggaacaacgaggccatt
gttcatgttgtagagactccagactgccccactggtccagacatcattccaattgtagcc
ggtgtggttgctggaattgtgctgattggtcttgccttactgcttatttggaagctttta
atgataattcacgacagacgggaatttgctaaatttgaaaaggagaaaatgaatgctaaa
tgggacacgggtgaaaatcctatttacaagagtgctgtgacaactgtggtcaatccaaag
tatgagggaaaatga

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