Perognathus longimembris pacificus (Pacific pocket mouse): 125366792
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Entry
125366792 CDS
T08928
Symbol
Heatr1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125366792 (Heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125366792 (Heatr1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125366792 (Heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
HEAT_EZ
RTP1_C1
Cnd1
HEAT_EF3_N
Ribosomal_S7
Motif
Other DBs
NCBI-GeneID:
125366792
NCBI-ProteinID:
XP_048223474
LinkDB
All DBs
Position
18:complement(2196054..2226589)
Genome browser
AA seq
2143 aa
AA seq
DB search
MTSLAQQLRRLALPQTDPSLLSRREAASLLFDPKEAAAIDRDTAFALGCTGLEELLGIDP
AFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLSPYFLLKPAQKCLEWLIHR
FHIHLYNQDSLIACVLPYHETKIFVRVIQLLKIDNPKHKWFWLFPVKQSGVPLARGTLVT
HCYKDLGFMDLICSLVTKSVKAFSERPGSSARLRVLLSFYASTIVAALLAAEDVSDNIVA
KLFPYVQKGLKSSLPDYRAATYMIICQISVKVIMEDTFVNSLASQIIRTLTSVPSLVRDG
LGCLIILLQRQKPETLGKKPFPPLCRVPNLVTMLQDMSETYDVSPLLRYMLPHLVLSAVH
HITGEETEETDGQMYQRLLEDILTKLPLRNSLDRLLANLLFEEYISYCSQEEIDPQKVSL
LNEQFLPLIRLLESKYPQTLDAVLEDHLKEITGLKKQELFHQFISLSTSGGKYQILADSD
TSLMLSLCHPLAPVRLLAVNHLKNIIKTSKEGVDESFVKDAILARLDDDSVDVVLSAVDA
FQIFQQHFSAEETVSHLLSVFQRAELSKSSQWYRVLEIAADMLVKEEILSGNQELANQVV
VRLLPFMLITDEDWESAETKIAIHLSKSGICSLHPILKGWKEALENVMKVTKPGKRIGIA
NQKLMWLLACNINSGDRALMLRMVEELISAAEKESVSVKQKVAFHVTVFVLVSCCSFAKE
THFPFAMRAFGLLQKKIKKLESVITAVEIPPEWHLELMLDRGLPEELWTHYVEQLASTRS
IAVEDSVLLVFSLKVFIFAVKAPKSFSKEARWWNPERLDEAGRHYLHLLLGLFELVLRGA
EALHFRVLMKLFLQVHLGDALQLFRFLSLLWTYPSSLADPLRCPVKPALRTQALYVGSAL
LAAQTTQCRQQLASASSPVVVSLLVNLGSPIKEVRRAALQCLQALSGLAGPFQLLIDHLV
PKAEEITSDPAYVVQDLATLFDELQREKKQKSHQKLSETLKTLLYCVYECPSYVAKDLLQ
VLQDVNSEMALSQLLPLVDRLLEKVEKDPMAVLKDEATALHLALGKYNEHSVSLLHKDPK
SLDTFVKAVHTTKELHPGVPTVQITALQKITKPFFSAVSDGKVQQKLLCVLFDLLVNCNN
TYCAQTVSSVFKGISVNSEQIRIELEPPDKAKSLGTVQQTRRQKMQQKKSQDVDSVQEVG
ASYWQRVTLILELLQHKKKLKSPQTLIPSLFNLLSRCLEPMSPEQGNMEYTKQLILSCLL
NICQKLSPDGGRIPKDIVDPEKFNVELIVQCIRLSEMPQTHHQALLLLGTAAGIFPDKVL
HNIMSIFTFMGANVMRLDDSYSFQVISKTVKMVIPALIQSDHGDSKEVTRNVEGIAVKII
SVFVDALPHVPEHRRLPILVQLVDTLGADKFLWVLLALLFEQYVTKTVLAAACGEKDAVL
EADTEFWISVCCEFGVPHQLQSLMNILQYLVRLPEEKEENTLKTGSVKTEVEEDTLQVFS
VDTHTSKQLRHFKFLSVSFMAQLLASKNFLKKVVESGGPQIFKGLEQRLLETVLSYINTV
AQSVEKNADKLTAKFWRALLSKAYDMLDKVNALLPTETFIAVLKGLLGNPLPSVRRKALD
LLNNKLQHNASWPGRTVHRFLKLLPVLLAIVQHKRREAGEEQAINRQTALYTLKLLCKNF
GAEHPEPFEPVLRAAVALVAPERDEDRNVLGSALLCVAELTATLDALAIPQLPSLMPSLL
AAVKSTGGPGHSEVCLLSALAALHRVVETLPHFISPYLEELLRQVIRLETVTREMGSASQ
ASVRLAALKTTLATRLAPRVLLPAMSRTHKDMRRAWQKHLGPFMSVLQEHIGVLKKEELL
SHQPQLTAFFLEALDFRAQHAESDLEEVGEAEGHIIACLVAMVVKLSEATFRPLFFKLFD
WAKSEDAPRDRLLTFFNVADRIADRLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDS
ERDPEKCCELLRAVLSCLHRIFLHDTQRFLSAERAQALMRPLVDQLENRLGGEERFQQRV
TEHLIPCIAQFSVAMADDSLWKPLNYQILLKTRDSSPKVRFAALLAVVALAEKLKENYIV
LLPESIPFLAELMEDECEEVERQCQKTVQQLEATLGEPLQSYF
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctggcgcagcagctgcggcgcctggcgctgccccagaccgaccccagcctc
ctgtcccggcgcgaggccgcctccctgctcttcgaccccaaggaagcggccgccatcgac
cgggacaccgccttcgccctcggctgcacgggcttggaggagctgctggggatcgaccct
gccttcgagcagtttgaagcgcctctgttcagccagctggcaaaaaccctggagcgcagc
gtccagaccaaagccgtgaacaagcagctggatgaaaacatttccttatttctcatccac
ctgtccccctacttcctgctgaagccagcgcagaagtgtctggaatggctgattcacagg
ttccatattcacctttacaatcaagatagtctcattgcctgcgttctgccgtaccacgag
acaaaaatatttgtacgggtgatacagctcctaaaaattgataacccaaagcacaaatgg
ttctggttgtttccagttaagcaatccggagtgcccctggctcgaggaacattggtcacc
cattgctacaaagaccttggcttcatggatttgatttgtagtctggtgaccaagtccgtg
aaggctttctccgagcgccccggaagctctgcgcggctgcgcgtgctcctgtctttctac
gcctccaccatcgtggccgccctgttggccgctgaggacgtgtcggacaacatagtcgcc
aagctgttcccctatgtgcagaaggggttgaagtcatctttgccagattacagagctgcc
acgtatatgatcatctgtcagatttctgtgaaagtgatcatggaagacacctttgtaaac
tcactggcttcgcagatcatcagaacactaaccagcgttccctccttggtcagagatggg
ttaggttgcttgatcatcctcctgcagagacagaagcccgaaacccttgggaaaaagcct
ttccctcccttgtgccgtgttcccaacctcgtcaccatgcttcaggacatgtccgaaaca
tacgacgtcagtcctctcctgcgctacatgctcccccatctggtcctctccgccgtccac
cacattacaggagaagaaactgaagagacagatggtcagatgtaccagaggctcttagaa
gacatacttaccaaactacccctgaggaacagcttagaccgtttgctggctaatcttctt
tttgaagagtatatttcatattgttcacaggaagaaattgatcctcaaaaagtatctttg
ctaaatgagcagtttcttccacttatcagactcttagagagcaagtacccgcaaacatta
gatgctgtactagaggaccacctaaaagaaattacaggtctgaagaagcaggagcttttt
caccaatttatttctctttctacaagtggagggaagtatcagattttggcagattctgat
acatcgttgatgcttagcctctgtcatccacttgctcccgtgagactcctagctgttaat
catctgaaaaatatcataaaaacttcaaaggagggcgtggacgaatctttcgttaaagac
gcgatcctggcccgccttgatgatgacagtgtggatgttgtgttgtccgccgtggatgct
ttccagatttttcaacaacacttcagtgcagaagagactgtgtcacatcttctgagtgtc
tttcaaagagcagagctctcgaagagcagccaatggtacagggtacttgagatagcggca
gacatgttggttaaagaagagatcctgagcggaaaccaggagctggcgaaccaagtggtt
gtgcgcttgctgccattcatgctcattactgatgaggactgggagtctgcggagaccaaa
attgctatacatttgtccaaatcgggaatttgctctctgcaccccatcttaaaagggtgg
aaggaagcgcttgagaatgtgatgaaagtcacaaaaccaggaaaacgaattgggatagca
aaccagaagctgatgtggttgttggcctgcaatataaactctggcgaccgcgcactgatg
ttgaggatggtggaggaattaatcagtgctgctgaaaaggaatcggttagtgtgaagcag
aaagtggccttccacgtgactgtgtttgtgctcgtctcttgctgctcatttgccaaagaa
actcactttccatttgcaatgagagccttcggcttgttgcagaagaagataaagaagttg
gagagcgtcattactgctgtggaaatcccccccgagtggcacctggagctgatgttggac
cgaggcttgccggaggagctgtggacccattacgtggagcagctggccagcacccgcagc
atcgctgtggaggactcggtgttgctggtcttttccctgaaagttttcatttttgccgtg
aaggctcctaagtctttttctaaagaggcccggtggtggaaccccgagcggctggacgag
gccgggaggcactacctgcacctgctcctggggctttttgagctggtcctccggggcgcc
gaggcccttcatttcagagtgctgatgaagcttttcctgcaggtgcacctgggagacgcc
ctgcagctgttcaggttcttgtccctcctgtggacctatccctccagcctcgccgacccc
ctgcgctgccccgtgaagcccgcactgcgcacgcaggccctctatgtgggctccgccttg
ctcgccgctcagaccacacagtgcaggcagcagctggcctccgcctcgtcaccagtggtg
gtgtctctgcttgtaaacctgggcagccccataaaagaagtgaggcgcgcggcccttcag
tgtctccaggccctcagcggactagcagggccgtttcagctgctcatcgatcacctggtt
cccaaagcagaggagatcacctctgatcccgcctatgtggttcaggatctggctacttta
tttgatgaactacagagagaaaagaaacagaaatctcatcaaaagctgtcggaaactctg
aagaccctgctttactgtgtatatgaatgcccatcgtatgttgcaaaagatttgctgcaa
gtccttcaggacgtcaacagtgagatggcgctttcccagttgctgcctttggtggaccgc
ttgctggagaaggttgagaaggaccccatggctgtcctgaaggacgaggccaccgctctg
catctggcgctggggaaatacaatgagcactccgtgtcgctgttacacaaggaccccaag
agcttggatacgtttgtaaaagctgtgcacacaacaaaggagctccacccaggagtgcca
accgttcagatcacagccctccagaagattacaaagcctttcttctcagctgtatcagat
ggaaaggtccagcaaaaactgctgtgcgtgttgtttgacctcctggtgaactgtaacaac
acctactgtgctcagactgtgagcagtgtctttaaagggatttccgttaactctgaacaa
atcagaatagagctggagccaccagataaagccaaatccttgggcaccgtccagcaaaca
agacggcagaagatgcagcagaaaaaatcacaggatgtagactccgttcaggaagttgga
gcttcatactggcagagagtaacgctcatcctcgagctactgcagcacaagaagaagctc
aaaagcccccagacactcataccaagtcttttcaacttgctgtcaaggtgcttggagccc
atgtcaccggagcaggggaacatggagtacaccaagcagctaattcttagctgtctgctc
aacatctgccagaagctgtcccccgacgggggcaggatccctaaagatatcgtggacccg
gagaagttcaacgttgagttgatagtccagtgcatccgcctctccgagatgccgcagacg
caccaccaagcccttttactcttgggcactgctgccggaatattcccagataaagttcta
cacaacatcatgtctatttttactttcatgggagccaatgttatgcgcttagatgattct
tacagctttcaagtgattagcaagacggtgaagatggtcattccagcgcttattcagtct
gaccacggagactccaaggaagtcacgaggaacgtggaagggatcgcggtgaagatcatc
agcgtgttcgtggacgcgctgccgcacgttcccgagcaccggcgcctgcccatcctggtc
cagctggtggacacgctcggggcggacaagttcctctgggtgctgctcgccttgctcttc
gagcagtacgtcacgaagacggtgctggcggccgcctgcggggaaaaggatgctgttttg
gaggcagacactgagttctggatttcagtgtgctgtgaattcggtgtcccgcatcagctg
caaagcttgatgaacatcctccagtacctggtgaggttaccagaggaaaaagaagagaac
accctcaagacaggctccgttaagactgaagtcgaagaagacacgctacaggtcttcagt
gtggacactcacacgagcaagcagctgcggcattttaagtttttgtcggtgtctttcatg
gcccagctcctagcttccaaaaatttccttaagaaggtggtcgaaagtgggggcccgcag
atcttcaaaggccttgagcagaggttgctagaaacggtgctcagctacatcaacaccgta
gcgcagtccgtggaaaagaacgccgacaaactcaccgccaagttctggcgcgcgctcctt
agcaaagcgtacgacatgctggataaggtcaatgccctgctccccacagagaccttcatc
gctgtgctcaaggggctgctgggcaatccgctgccctccgttcgtcggaaggcgctggat
cttctgaataacaagctgcagcacaacgcgtcctggccggggaggacggtccaccgcttc
ctcaagctccttccagtccttctggccatcgtgcagcacaagaggagggaggcgggggaa
gagcaggcgatcaaccggcagacggcgctctacaccctcaagctgctctgcaagaacttc
ggggccgagcacccggagcccttcgagccggtgctgcgcgccgcggtggcgctcgtcgct
ccggagcgggacgaggaccggaacgtgctggggagcgccctgctgtgcgtggccgagctc
acggccaccctggacgcgctggccatcccgcagcttcccagcctcatgccgtcgctgctg
gcggccgtgaagagcacgggcgggcccgggcacagcgaggtgtgcctgctgagcgcgctg
gccgcgctgcacagggtggtggagacgctgccgcacttcatcagcccctacctggaagag
ctgctgcgccaggtgattcgcctggagacggtcacgcgagagatgggctccgcctcccag
gccagcgtccggctcgcggccctgaagacgacgctggccaccaggctggcgccccgcgtc
ctcctgccggccatgagcaggacgcacaaggacatgcggcgggcctggcagaagcacctg
ggcccgttcatgagcgtcctgcaggagcacatcggggtgctcaagaaggaggagctcctg
tcgcaccagcctcagctcaccgccttcttcctggaggccctggacttccgggcgcagcac
gccgagagcgacctggaggaggtcggggaggcggagggccacatcatcgcctgcctcgtg
gccatggtggtgaagctgtcggaggccaccttcagacccctcttcttcaagctgttcgac
tgggccaaatccgaggacgccccgagggaccggctgctgacgttcttcaacgtggccgac
cgcatcgccgacagactgaaaggcctgttcacgctgtttgcggggcacctggtgaagccc
ttcgcagacaccttgaaccaggtgaacatctccaaaacagacgaagcgttcttcgactcg
gagcgcgaccctgagaagtgctgcgagctgctgcgggccgtgctgagctgcctgcaccgg
atcttcctgcacgacacccagcgcttcctgagcgcggagcgcgcccaggcgctcatgcgg
ccgctcgtcgaccagctggagaacaggcttggcggggaggagcgcttccagcagcgggtc
acggagcacctcatcccctgcatcgcccagttctccgtggccatggcggacgactccctg
tggaagcccctgaactaccagatcctgctcaagacgcgagactcctcgcccaaggtgagg
tttgccgccttgcttgctgtggtggcgctggctgagaagctcaaggagaattacatcgtg
ctgctgcccgagtccattcccttcctagcggaattgatggaagatgagtgtgaagaagtg
gaacgccagtgccagaagaccgtccagcagctggaggccacgctgggggagccgctgcag
agctacttctga
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integrated database retrieval system
