Perognathus longimembris pacificus (Pacific pocket mouse): 125366861
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Entry
125366861 CDS
T08928
Symbol
Vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04820
Cytoskeleton in muscle cells
plop05169
Epstein-Barr virus infection
plop05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125366861 (Vim)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
125366861 (Vim)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125366861 (Vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125366861 (Vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125366861 (Vim)
04147 Exosome [BR:
plop04147
]
125366861 (Vim)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125366861 (Vim)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
125366861 (Vim)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125366861 (Vim)
Exosomal proteins of other cancer cells
125366861 (Vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
RBD-FIP
Sec10_N
Laminin_II
TPR_MLP1_2
GeBP-like_DBD
DUF4515
Motif
Other DBs
NCBI-GeneID:
125366861
NCBI-ProteinID:
XP_048223541
LinkDB
All DBs
Position
18:13938103..13948298
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSTSSSSYRRMFGGPGTGSRPSSGRSYVTTSTRAYSLGSALRPSTSRSFYASSPGGG
YVQRSSAVRVRSAVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNEKARVEVERDNLGE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLSRLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSLEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFAS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccgatcgacgtcctcctcctcctaccgcaggatgttcggaggccccggcacc
gggagccgaccgagctccggccggagctacgtgaccacgtccacccgcgcgtacagcctg
ggcagcgcgctgcgccccagcaccagccggagcttctacgcctcgtccccgggcggcggc
tacgtgcagcgctcgtccgcggtgcgggtgcgcagcgcggtgcccggcgtgcgcctgctg
caagactcggtggacttctcgctggccgatgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctcaacgatcgcttcgccaactacatcgacaag
gtgcgcttcttggagcagcagaacaagatcctgctggccgagctggagcagctcaagggc
cagggcaagtcgaggctgggggacctctacgaggaggagatgcgggagctgcgtcgccag
gtggaccagctcaccaacgagaaagcgcgcgtggaagtggaacgggacaacctgggcgag
gacatcatgcgactccgggagaaattgcaggaagagatgctgcagagggaggaagccgaa
agcaccctgcagtctttcagacaggatgtggataatgcatccctgtcacgccttgacctt
gagcgaaaagtggaatcattgcaagaagagattgcctttttgaagaagctacatgatgag
gaaatccaggagctgcaggcccagatccaggagcagcatgtccagattgacatggatgta
tctaagcctgacctcaccgcagctctgcgggacgttcgtcagcagtatgaaagtgtggct
gccaagaacctccaggaggcggaggaatggtacaagtccaagtttgctgacctctcagag
gctgctaaccgcaacaatgacgccctgcgccaggcgaagcaggagtccaatgagtaccgg
agacaagtgcagtccctcacctgcgaagtggacgcgcttaaaggaactaatgaatctctg
gaacgccagatgcgtgaaatggaagagaacttttctcttgaagctgctaactaccaagac
actattggccgccttcaggacgagattcagaacatgaaggaagagatggctcgtcatctt
cgtgaataccaagacttgctcaatgtgaagatggcccttgacattgagattgccacctac
aggaagctgctggagggcgaggagagcaggatttctctgcctcttccaaactttgcctcc
ttgaacctgagagaaacaaatctggattcactccctctggtcgacacccactctaaaaga
acacttctgatcaagacggtggaaaccagagatggacaggttatcaatgaaacttctcag
catcatgatgatcttgaataa
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