Perognathus longimembris pacificus (Pacific pocket mouse): 125367104
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Entry
125367104 CDS
T08928
Symbol
Arid4b
Name
(RefSeq) AT-rich interactive domain-containing protein 4B isoform X1
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125367104 (Arid4b)
03036 Chromosome and associated proteins [BR:
plop03036
]
125367104 (Arid4b)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
ARID
125367104 (Arid4b)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125367104 (Arid4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
DUF5666
Motif
Other DBs
NCBI-GeneID:
125367104
NCBI-ProteinID:
XP_048223667
LinkDB
All DBs
Position
18:complement(1739652..1841981)
Genome browser
AA seq
1314 aa
AA seq
DB search
MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPL
KVGAIVEVKNVDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQTDELLGKVVCVD
YMSLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFKDGKFTSVPRKDVHEITSDSAPK
PDAVLKQAFDHALEFHKSRTVPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEE
EIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGA
VWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEKVNKSCKECE
NVKEIKVKEEGETEIKEIKTEEERTIMPKEEKLPEDEMERKENIKPSLGSKKNLLESIPL
QSDQEKEVSNKKPEENENLQDKDDGTARVDQSLSIKVEAEEEKAKSGDETNKEEDEDDEE
AEEEEEEEEEEEEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEV
LYLVHYCGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNKLDKEKDKDEKYSPKNCKL
RRLSKPPFQTNPSPEMVSKLDLADARNSDTAHIKSIEITSILNGLQASESSAEDSEPEDE
RGAQDTDENGREDAKADHLAHARNELTAKEEQNSSSLLEENKGQSDLVIPKPVSKSPERL
RKDRDREGISEDTDFEDDDDITKKRKDVKKDSTDKSSKPQIKRGKRRYCSTEECLKTGSP
GKKEERAKSKESLCIENSSNSSSDEEEEEKSKAKMTPTKKYNGLEEKRKSLRASGFYSGF
SEVAEKRIKLLNTSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEPAASPPHP
APEEGAAEEPLQTVAEEESCSPSAELEKLPPATIDTKPIEEKTVDVSERKADFPSSGSNS
VLNTPPTTPESPSSVTVTEASQQQSSVPVSEPLAPSQEEVRSIKSETDSTIEVDSVVGEL
QDLQSEGNSSPAGFDASVSSISSNQQEPEHPEKACTGQKRVKDAQGGGNPSKKQKRSHKA
TVVNNKKKGKGPNSSDSEELSAGESVTTTQPIKSVSTGVKSHSAKSPARTQSPGKCGKNG
DKDPDLKDPGNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEIRKHYLSLKSEVASID
RRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPAMPSASQNGVSVECR
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccttgatgagcctccctatttgacagtgggcacagatgtaagtgccaaatac
cgaggcgccttttgtgaagccaaaatcaagacagcaaaaagacttgtcaaagtcaaggtg
acctttagacatgattcttcaacagtggaagttcaggatgatcacataaagggaccacta
aaggtgggagctattgtggaagtgaagaatgttgatggtgcatatcaggaagctgttatc
aataaattaacagatgcaagttggtacactgtagtttttgatgatggagatgagaagacg
ctgagacgatcctcactgtgcctgaaaggagagaggcactttgccgaaagcgagacatta
gaccagctcccactcaccaaccctgagcattttggcactccagtcataggaaagaaaaca
aatagaggaagaagatctaatcatataccagaagaagagtcttcatcatcttccagtgat
gaagatgaggatgacaggaagcagactgatgaactactaggcaaagttgtatgtgtagat
tatatgagtctggataaaaagaaagcactgtggtttccggcactggtggtttgtcctgat
tgtagtgatgagattgctgtgaaaaaagataatattcttgttcgatctttcaaagatggc
aaatttacttcagttccaagaaaagatgtccatgaaattactagtgacagtgcaccaaag
cctgatgctgtattaaaacaagcctttgatcatgcacttgaatttcacaaaagcagaact
gttccagctaactggaagactgagttgaaagaagacagctctagcagtgaagcagaggag
gaagaagaggaagaagatgatgaaaaagaaaaggaggataatagcagtgaagaagaggaa
gaaatagaaccatttccagaagaaagggagaacttccttcagcagttgtacaaatttatg
gaagacagaggaactcctataaacaaacgacctgtacttggatatcgaaatttgaatctt
tttaagttattcagacttgtacacaaacttggaggatttgataatattgaaagtggagct
gtttggaaacaagtctaccaagatcttggaattcctgtcttaaactcagctgcaggatac
aatgttaaatgtgcttataaaaaatatttatatggttttgaggaatactgtaggtcggct
aatattgagtttcagatggcattgcctgagaaagttaataagtcatgtaaggaatgtgaa
aatgtcaaagaaataaaagtgaaggaagaaggtgaaacagagatcaaagaaataaagact
gaagaggaaaggactatcatgccaaaagaggagaagcttccagaggatgagatggaaaga
aaggaaaatattaagccttctctgggaagtaaaaagaatttattagagtctatacctctg
cagtctgatcaggaaaaagaagtttccaataaaaagccagaagaaaatgaaaatctgcaa
gataaagatgatggcactgctagggtagatcagtccctcagcataaaggtagaagctgaa
gaagaaaaagcaaaatctggagatgaaacgaataaagaggaagatgaagatgatgaagaa
gcagaagaggaggaggaggaggaggaagaggaggaggaagatgatgacgacaacaatgag
gaagaggagtttgagtgctacccaccaggcatgaaagtccaagtgcggtatggacgaggg
aaaaatcaaaaaatgtatgaagctagtataaaagattctgatgtcgaaggtggagaggtc
ctttacttggtgcattactgcggatggaatgtgagatatgatgaatggattaaagcagat
aaaatagtaagacctgctgataaaaatgtgccgaagataaaacataggaaaaaaataaag
aataaattggacaaagaaaaagacaaagatgaaaaatattctcctaaaaactgtaaactt
cgacgcttgtcaaaacccccgtttcagacaaatccatctcctgaaatggtatccaaactg
gatcttgctgatgccagaaattctgacacagctcatattaaatccatagaaatcacttcc
atcctcaatggacttcaagcctctgaaagttctgccgaggacagcgagcccgaggatgag
agaggcgctcaggacacagacgagaatggcagagaggacgcgaaggcagaccatttggcc
cacgccaggaatgaactcactgcaaaagaggaacagaacagctcctctttgctagaagaa
aacaaaggacagtcggatttggtaatacccaagccagtgtcaaaatctccagaaagatta
agaaaagatagagatagagaaggaatctcagaagatactgattttgaagatgatgatgac
atcacaaaaaagagaaaagatgttaagaaggatagtacagataaatcttcaaagccacaa
ataaaacgtggtaaaagaagatactgcagtactgaagaatgtttaaaaactggatcacct
ggcaagaaggaagagcgagctaagagcaaagaatcactttgcatagagaacagcagtaac
agctcttcagatgaagaggaagaggaaaaatcaaaagcaaagatgacaccaacaaagaaa
tacaatggtttggaggaaaaaagaaaatctctacgggcaagtggtttttattcaggattt
tcagaagtggcagaaaaaagaataaaacttttaaatacctccgatgaaagacttcaaaac
agcagggctaaagatcgaaaagatgtctggtcaagtattcaggggcagtggcctaagaaa
acacttaaggagctgttttcagactctgatactgagcccgcagcatccccgccccatcct
gccccagaggaaggggcagcagaggaacccctgcagacggtggctgaggaggagagctgc
tcaccaagtgcagagctagagaagctgccgccagccactattgacactaagcccattgaa
gagaagaccgtcgatgtcagtgagcgaaaggctgattttccaagtagcggcagtaattca
gtgctcaatacccctcctactacacctgaatcgccttcatccgtcactgtaacagaagcc
agtcagcagcagtcttctgtcccagtgtcagaacccctggctcccagccaggaagaggtt
cgaagtatcaagagtgaaaccgacagcacaattgaggtggatagtgttgtgggagagctc
caggacctccagtccgagggaaacagctcaccagcaggctttgatgccagcgtgagttcc
atcagtagcaatcagcaggaacctgaacatcctgaaaaagcctgtacaggccagaagagg
gtgaaagatgctcagggaggcggaaatccatcaaagaagcagaaaagaagccataaagcc
acagtggtgaacaacaaaaagaaggggaaaggcccgaacagtagtgatagtgaagaactt
tcagctggtgaaagtgtgactacgactcagccaatcaagtcagtctccacaggcgtgaag
tcccatagtgctaaatctcccgcaaggacacagtctcccgggaaatgtggaaagaatggg
gataaggaccctgatctcaaggaccccggtaatcggctacccaaggtttacaagtggagc
ttccagatgtcggacctggaaaatatgacaagtgctgaacgtatcacaattcttcaagaa
aaactgcaagaaatcagaaaacattacctgtctttaaaatctgaagtagcttccattgat
cggaggagaaagcgtttaaagaagaaagagagagaaagtgcggctacatcctcttcttcc
tcgtcgccttcctccagttctataactgctgcagttatgctgacgttagcagagccggcc
atgcccagcgcatcacagaatggagtctcggttgagtgcaggtga
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integrated database retrieval system
