Perognathus longimembris pacificus (Pacific pocket mouse): 125367137
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Entry
125367137 CDS
T08928
Symbol
Rpp38
Name
(RefSeq) ribonuclease P protein subunit p38
KO
K14523
ribonucleases P/MRP protein subunit RPP38 [EC:
3.1.26.5
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125367137 (Rpp38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125367137 (Rpp38)
03016 Transfer RNA biogenesis [BR:
plop03016
]
125367137 (Rpp38)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125367137 (Rpp38)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125367137 (Rpp38)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125367137 (Rpp38)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125367137 (Rpp38)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125367137 (Rpp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
125367137
NCBI-ProteinID:
XP_048223720
LinkDB
All DBs
Position
18:12514713..12520321
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AA seq
276 aa
AA seq
DB search
MAEAEAPQAPRRGSVRKARPLVVKTSLNNPYAICWSTLQREDMYFILQSIEDRFVSVGLQ
KVEDRKKRRKPSREGCSSGVDSGGPGKEKQPEAGQRVSGWSPLHIRRQLAIGVNEVTKAL
ERGELLLVLVCKSVKPAIITSHLVQLSLSRDVPACQVPRLSERLAPVLGLKCLLALGFKK
STTDFAEQVEAILPRVPRLYVPWLLDRLGAAGDSDSSESHNEESLAASSPDPGKRKRKSE
GREASGVALQPLKVKKLIPNPNKIRKPPKNKKPMSK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgaggccccgcaggctccccggcggggatctgtccgcaaggcgaggcct
ctggtggtgaagacgtccctgaacaacccatatgccatctgctggagcaccctgcagagg
gaggacatgtacttcatcctgcagagcatcgaggacaggttcgtgtctgtgggactccag
aaagtcgaggacaggaagaaaaggaggaagccgagcagagaaggctgcagctcgggggtg
gacagtggtgggcctgggaaggagaagcagcctgaggccggccagcgggtgtcggggtgg
tcgcccctgcacatccggaggcagctggccatcggcgtcaacgaggtcaccaaggccctg
gagaggggcgagctgctcctggtcctggtgtgcaagtccgtcaagcctgccatcatcacc
tcccacctggtccagctgagcctaagcagagacgtgcccgcctgtcaggtgccccggctc
agcgagaggctggcccccgtcctgggcttgaaatgcctgctggccttggggttcaagaag
agcaccaccgacttcgccgagcaagtggaggccatccttcccagggtgccccgcctgtac
gtgccgtggctgctggacaggctcggggccgctggagacagtgactcctcagaaagccac
aacgaggagagcctggcggcctcctccccagacccaggaaagcgcaagaggaaatcggag
gggagggaggcttctggggtggccttgcagcctcttaaagtgaagaaactcattcccaac
cctaataagattaggaagccacccaaaaataagaagcccatgtcaaagtaa
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