KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125367176
Entry
125367176         CDS       T08928                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03020  RNA polymerase
plop03420  Nucleotide excision repair
plop04623  Cytosolic DNA-sensing pathway
plop05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125367176
  09124 Replication and repair
   03420 Nucleotide excision repair
    125367176
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    125367176
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    125367176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plop03021]
    125367176
   03400 DNA repair and recombination proteins [BR:plop03400]
    125367176
Transcription machinery [BR:plop03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125367176
  RNA polymerase III system
   RNA polymerase III
     125367176
  RNA polymerase I system
   RNA polymerase I
     125367176
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125367176
SSDB
Motif
Pfam: DNA_RNApol_7kD DUF5816 Cytochrome_C7 MCM_OB HypA DZR zinc_ribbon_13 zf-RRN7
Other DBs
NCBI-GeneID: 125367176
NCBI-ProteinID: XP_048223758
LinkDB
Position
18:13277348..13277662
AA seq 58 aa
MDTQKDVLPPKQQPMIYICGECHTKSEMKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggacactcagaaggacgttctacccccgaagcagcagcccatgatatatatttgtgga
gagtgtcacaccaaaagtgaaatgaaatccagagatccaatcagatgcagagaatgtgga
tacagaataatgtacaagaaaaggactaaaagattggtggtttttgatgctcgataa

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