Perognathus longimembris pacificus (Pacific pocket mouse): 125367201
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Entry
125367201 CDS
T08928
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05202
Transcriptional misregulation in cancer
plop05206
MicroRNAs in cancer
plop05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125367201 (Zeb1)
05206 MicroRNAs in cancer
125367201 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
125367201 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125367201 (Zeb1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125367201 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
125367201
NCBI-ProteinID:
XP_048223771
LinkDB
All DBs
Position
18:22363381..22512254
Genome browser
AA seq
1126 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESVTDAGDCEGGVPED
DLPTDQTVLPGSSEREGSAKNCWEDDGKEGQGILGPEDQAGDAGCTVKDDECDSDAENEQ
NHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGYK
RFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRKF
KCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLLPVNG
RPRTGLKTPQCSSPSLSASPGSPTRPQIRQKTENQPLQEQLSVNQIKTEPVDYEFKPIVV
ASGINCSTPIQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAV
DGNVIRQVLENNQANLASKEQETISASSIQPGGHSVISAISLPLVDQDGTTKIIINYSLE
QPSQLQVVPQNLKKENPVPTSSCKSEKLPEDLTVKTEKDKGFEGGVNDSTCLLCDDRPGD
LDALPELKHYDLKQPAQPPPLPAPEVEKPESSVSSGTGDGNLSPSQPPLKNLLSLLKAYY
ALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGKGNIPAKNDE
QPQSTNADEPQDSTISLQSPLKMSNSPGLPVGSTVNGSRSSTPSPSPLNLSSARNTQGYS
YPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKD
NCVTDSEPVVNVIPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIPQV
AYTYSTTVSPAIQEPPLKVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTEN
GMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQ
CDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEVLMNEHAGTRASPSQGD
SDERESLTREEDEDSEKEEEEEEDKEIEELQEEKECGKPQGEEEEEEEEEEEDMEEEEGE
EAEDERKEANTEGPMKDEGAVPQAGSLEQKVSESTEQVSEEKTNEA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaattcagactcagatgatgaagacaaactccat
attgtggaagaagaaagtgttacggacgcgggtgattgtgaaggtggagtgcctgaagat
gacctgcccacagaccagacagtgttaccagggagcagtgagcgagaagggagtgccaag
aattgctgggaagatgatggaaaggaagggcaaggaatcctggggcctgaagatcaggca
ggggacgcaggatgcacagtaaaagatgatgaatgtgactcagatgcagaaaatgaacaa
aatcatgatcctaatgttgaagagtttctgcaacaacaagacactgctgtgatttatccc
gaggcacctgaagaagaccagcggcaggggacaccggaagccagtggccatgatgaaaat
ggaacaccagatgcattttcccaattactcacctgcccgtattgtgatagaggttacaaa
cgctttacctctttgaaagaacacattaaatatcgccatgaaaagaatgaagataacttc
agttgctccctgtgcagctacacctttgcctacagaacccaacttgaacgtcacatgaca
tcacataagtcagggagagatcagagacatgtgacccagtctgggggtaatcgtaaattc
aagtgcactgaatgtggaaaagctttcaaatacaaacaccacctgaaagagcacttaaga
attcacagtggagagaagccatacgaatgcccaaactgcaagaagcgtttttcccattct
ggttcctatagttcacatataagcagtaagaaatgtatcagcctgctgcctgtgaatggg
cgacccagaacaggactcaagacaccccagtgttcctcgccgtcgctctctgcgtcccca
ggcagtcccacacggccacagatacggcagaagacagagaatcaaccccttcaagagcaa
ctctctgtaaaccaaattaaaactgagcctgtggattatgaattcaaacccatcgtggtt
gcttcaggaatcaactgttcaacccctatacaaaacggggtttttagtggtggtggccca
ttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggc
ttggtatctcccataagtatcaatttaagtgatatccagaatgtacttaaagtggcagta
gatggtaatgtaataaggcaagttttggagaataatcaagccaatcttgcatccaaagaa
caagaaacaatcagtgcttcatccatacaaccaggcggccattctgttatttcagccatc
agtcttcctttagttgatcaagatggaacaaccaaaattatcatcaactacagtcttgag
cagcctagccaacttcaagttgttccccaaaatttaaaaaaagaaaatccagttcctaca
agcagctgcaaaagtgagaagttaccagaagatctcactgttaaaactgagaaagacaaa
ggctttgaagggggggtgaatgatagcacttgccttctatgtgatgatcgtccaggtgac
ctcgatgcacttccagaattaaagcactatgacctaaagcagcctgctcagccgcctcca
ctcccagccccagaagttgagaagcccgagtcctctgtctcttcaggtactggagatggc
aatttgtctcccagtcagcctcctttgaagaatctcttgtctctcctaaaagcctactat
gctctgaatgcacaaccaagtgcagaggagctctcaaaaatcgctgattctgtaaaccta
ccactggacgtagtaaaaaagtggtttgaaaagatgcaagctggacagatttcagtgcag
tcttctgaaccatcttctcctgaaccaggcaaaggaaatatacctgcaaaaaatgatgag
cagccccaatctacaaatgcagatgaaccccaggacagcacaataagtctacaaagtcct
ctgaagatgtctaattctccgggtttaccagtgggatcaacagtcaatggttccagaagt
agtacaccatccccatcacctttaaacctctcgtcagccagaaacacacagggttattct
taccccgcagaaggtgcacaggaagagccacaagtcgaacctcttgatctttcactacca
aagcagcagggagagttattggaaaggtcaactatcactagtgtttaccagaacagtgtt
tattctgtccaagaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggac
aattgtgttacagactcagaaccagttgtaaatgtaatcccaagtgccaaccccataaat
attgctatacctaccgtcactgcccagttacccacaattgtggccattactgaccagaac
agtgttccatgcttacgagcactcgctgccaataagcagactattctgattccacaggtt
gcatacacatactcaactacagtcagccctgcaatccaggaaccacctctgaaagtgatc
cagccaaatggaaatcaggatgaaaggcaagacactagctcagaaggagtatcaaatgtg
gaggatcaaaatgactctgattctacacctcccaaaaagaaaatgaggaagacagaaaat
ggaatgtatgcatgtgacttatgtgataagatatttcaaaagagtagctcattgttgaga
cacaaatatgagcacacaggtaaaagacctcatgagtgtggaatctgtaaaaaggctttt
aaacacaagcatcacttgattgaacacatgcgcctacattcaggagaaaagccctatcaa
tgtgacaagtgtggaaagcgcttctcacactcgggatcttattctcagcacatgaatcac
cgctactcctattgcaagagagaagcagaagaacgagacagcacagagcaggaagaggca
gggccggaagtcctgatgaatgagcatgccggtaccagggcgtctccctcccagggagac
tccgatgagagagagagcttgacaagggaagaggatgaagacagtgaaaaggaggaagaa
gaggaggaggataaagagatagaagaattgcaggaagaaaaggaatgtggaaaaccacaa
ggggaggaggaggaggaagaggaggaggaggaggaagacatggaagaagaggaaggagaa
gaggcagaggatgaaaggaaagaagcaaacactgaagggccaatgaaggatgagggggct
gtcccccaggctggcagcttagagcaaaaagtcagcgagagtactgagcaggtgtctgaa
gagaaaacaaatgaagcctaa
DBGET
integrated database retrieval system
