Perognathus longimembris pacificus (Pacific pocket mouse): 125367274
Help
Entry
125367274 CDS
T08928
Symbol
Yme1l1
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1 isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125367274 (Yme1l1)
Peptidases and inhibitors [BR:
plop01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
125367274 (Yme1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
TIP49
AAA_5
AAA_22
RuvB_N
AAA_17
DUF815
Mg_chelatase
IstB_IS21
AAA_18
AAA_33
AAA_14
AAA_28
Zeta_toxin
nSTAND3
FumaraseC_C
AAA_7
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125367274
NCBI-ProteinID:
XP_048223893
LinkDB
All DBs
Position
18:complement(23106724..23150745)
Genome browser
AA seq
715 aa
AA seq
DB search
MFSLSSTVQPQVTVPLSHLINAFHSPKKPSFSANTSVSQNQHRDIVPEREAPTSEPALNL
RDLGISELRIGHIDQLIENLLPGFYKGKNVSSHWHTSHVSAQSFFENKHGYIDMFSALRS
SCLYRQHSRTIHNICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAESQNTAPSFVKG
FLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILF
VLLLFGIYGLLKNPFLSVRFRTTTGLDSGVDPVQMKNVTFEHVKGVEEAKQELQEVVEFL
KNPQKFTALGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGAS
RIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVII
IGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGT
VGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAY
HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGR
VAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTAKLSPETQSAIE
QEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLELR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcgagcacggtgcagccccaggttacagttcctctcagtcatcttatc
aatgccttccattcaccaaaaaaaccctctttctctgccaatacgtcagtttctcaaaac
cagcatcgagatatagttcctgaacgtgaggctcccaccagtgagcctgcacttaattta
agggaccttggaatatctgaattaagaattggccatattgaccaactgatagaaaatcta
cttcctggattttataaaggcaaaaatgtatcttcccattggcatacatctcatgtctct
gcacagtccttctttgaaaataaacatggttacatagatatgtttagcgctttacgttcc
tcttgcttatacagacaacattcaagaactattcataacatttgttcagatcttcagtac
tggccagttttcatacagtctcgaggttttaagactttgaaatcaaggacacgacgtcta
cagtctacctctgagagattagcagaatcacagaatacggcaccatcatttgtgaagggg
tttcttttgcgggacagaggatcagatgttgagagtttagacaaactcatgaaaactaaa
aatatacctgaagctcaccaagatgcatttaaaactggttttgcagagggttttctgaaa
gctcaagcattaacacaaaaaaccaatgattccctaaggcgaactcgtttgattctcttt
gttctgctgttatttggcatttacggactcttaaaaaacccatttttatctgttcgcttc
cggacaaccacagggcttgattctggagtagatcctgtccagatgaaaaatgtcaccttt
gagcatgttaaaggagtggaggaagctaaacaagaattacaggaggttgttgagttcttg
aaaaatccccaaaaatttactgcacttggcggtaaactcccaaaaggaattcttttagtt
ggaccacctggaacaggaaagacacttcttgctcgagctgttgcaggagaagctgatgtt
cctttttattatgcttctggatcagaatttgatgagatgtttgtgggtgtaggagccagc
cgtatcagaaatctttttagggaagcaaaagcaaatgctccttgtgttatatttattgat
gaactagactctgttggtgggaagaggattgagtctccaatgcatccatattcaaggcag
actataaaccagcttctcgctgaaatggatggttttaaacccaatgaaggagtaatcatt
ataggagctacaaacttcccagaggcattagacaatgccctaatacgtccaggtcgtttt
gacatgcaagttacagttccaaggccagatgtaaaaggacgaactgaaattttgaaatgg
tatctgaataaaatcaagtttgataagtctgttgacccagaaatcatagctcgaggtact
gttgggttttctggagcagaattggagaatctggtgaaccaagctgcattaaaggcagct
gttgatggcaaagaaatggttaccatgaaggaattagagttttccaaagataaaattctt
atgggacctgaacgaagaagcgtggaaattgataataagaacaaaactattacagcgtat
catgaatctggtcatgctattattgcatactacacaaaggatgcaatgcctatcaacaaa
gctacaatcatgccacgagggccaacacttggacatgtgtcattgttgcctgagaatgac
agatggaatgaaactagagcccaactgcttgcacaaatggatgttagtatgggaggaaga
gtagcggaggaacttatatttggaactgaccatattacaacaggtgcttctagtgatttt
gataatgcaacaaaaatagctaagcggatggttacaaaatttggaatgagtgaaaagctt
ggagtgatgacctacagtgatacagctaaactgagtcctgaaactcagtctgccattgag
caagaaataagaatccttctgagggagtcatatgaaagagcaaagcatatcttgaaaact
catgcaaaagagcacaagaatctagcagaagctttattgacctatgagactttggatgcc
aaagagattcaaattgttcttgaggggaagaaattggaactgagatga
DBGET
integrated database retrieval system
