Perognathus longimembris pacificus (Pacific pocket mouse): 125367335
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Entry
125367335 CDS
T08928
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04137
Mitophagy - animal
plop04141
Protein processing in endoplasmic reticulum
plop05014
Amyotrophic lateral sclerosis
plop05022
Pathways of neurodegeneration - multiple diseases
plop05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125367335
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125367335
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
125367335
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125367335
05022 Pathways of neurodegeneration - multiple diseases
125367335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125367335
03009 Ribosome biogenesis [BR:
plop03009
]
125367335
04131 Membrane trafficking [BR:
plop04131
]
125367335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125367335
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125367335
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125367335
Membrane trafficking [BR:
plop04131
]
SNARE
SNARE associated proteins
Others
125367335
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125367335
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125367335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
125367335
NCBI-ProteinID:
XP_048223988
LinkDB
All DBs
Position
1:complement(130157145..130176165)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggagccgattcaaaaggtgatgacttatcaacagccattctcaaacagaag
aaccgtcccaaccggttaattgttgatgaagccatcaatgaggacaacagtgtggtgtcc
ttgtcccagcccaagatggatgaactgcagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttagaaataaccttcgcgtacgcctaggagatgtcatc
agcatccagccatgccctgatgtgaagtacggcaaacgcatccatgtgctacccatcgat
gacacggtggaaggcatcactggcaatctctttgaggtataccttaagccgtacttcctg
gaagcttatcggcccattcggaaaggagacattttccttgtccggggtgggatgcgtgct
gtggagttcaaagtagtggaaacagatcctagcccttactgcattgttgctccagacaca
gtgatacactgtgaaggggaacctatcaaacgagaggatgaagaagaatccctgaatgaa
gtaggatatgatgacattggtggctgtaggaagcagttagctcagataaaggagatggtg
gagctgcctctgagacatcctgcactatttaaagcaattggtgtaaagcctcctcgggga
atcttactctatggacctcctggaacaggaaagaccctgattgctcgagctgtggcaaat
gagactggagccttcttcttcctgatcaatggtcctgagattatgagtaaattggctggt
gagtctgagagcaatcttcgtaaagcctttgaggaagctgaaaagaatgctcctgctatt
atcttcattgatgagctcgatgctattgctcccaaaagagaaaaaactcatggggaggtg
gagcgacgtattgtatcacagttattgactctcatggatggtctaaagcagagagcacat
gtaatagttatggcagcaaccaacagacctaacagcattgacccagctttacggagattc
ggtcgttttgatagggaagtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccataccaagaatatgaagttggcagatgatgtggacctggaacaggtagcc
aatgagactcatgggcacgtgggtgctgacttggcagccctgtgctcagaggctgctctg
caagccatccgcaagaagatggatctcattgatctagaggatgagaccattgatgctgag
gttatgaactccctggcagttactatggatgatttcaggtgggctttgagtcagagcaat
ccatctgcactgagggaaactgttgtggaggtgccacaagtaacctgggaagacattggg
ggcctggaagatgtcaaacgggagcttcaggaattggtccagtatcctgtggagcaccca
gacaaattcctcaagtttggtatgacaccctccaaaggagttcttttttatggacctcct
gggtgtggaaagactttgctggctaaagccattgctaatgaatgccaggccaacttcatc
tccatcaaaggtcctgagctactcaccatgtggtttggggagtctgaggccaatgtcaga
gaaatctttgacaaggcacgccaagctgccccctgtgtgctattctttgatgagctggat
tccattgcaaaggctcgtggtggtaatattggagatggtggtggggcagctgatcgagtc
atcaaccaaatcctgacagaaatggatggcatgtccacaaaaaagaacgtgtttatcatt
ggcgctaccaaccggcctgacatcattgatcctgccatcctaagacctggccgccttgat
cagctcatctatatccctcttccagatgagaagtctcgtgttgccatcctcaaggccaac
ctgcgcaagtccccagttgccaaggatgtagatttggagttcctggctaaaatgactaat
ggcttctctggagctgacctgactgagatttgccaacgtgcttgtaaactggccattcgt
gaatccattgagagtgaaattaggcgagaacgggagaggcagacaaacccatcagccatg
gaagtagaagaggatgatccagtgccagagatccgcagagatcactttgaggaagccatg
cgctttgcccgccgttctgtcagtgacaatgacattcggaagtatgaaatgtttgctcag
acccttcaacagagtcgaggatttggcagcttcagattcccttcaggaaaccaaggtgga
gctggccccagtcagggcagtggaggtggcacaggtggcagtgtatacacagaagacaat
gacgatgacctgtatggctaa
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