Perognathus longimembris pacificus (Pacific pocket mouse): 125367427
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Entry
125367427 CDS
T08928
Symbol
Ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125367427 (Ddx4)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125367427 (Ddx4)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125367427 (Ddx4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125367427
NCBI-ProteinID:
XP_048224044
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All DBs
Position
19:32974507..33040624
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AA seq
735 aa
AA seq
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MGDEDWEAEIIKPHMSSYVPVFEKDKYSSGANGDTFNRASVSSPEMDNGSSRKDPFLRTG
FGSGRSLGNRDAGEFSKKETIPTMGSFGSGKGFGNRGFSNNKFEEGDSSGFWKESNNDCE
DNQTWNRGFSKRGGFQDGNDSEASGPSRRGGRGSFRGCRGGFSGIGRPSGGEYDQDEGAP
RTSGLFGSRRPALSGAGNGDTFQSRSGSGSGSGSGRGGYKGLNEEVVTGTGKNSWKSEAE
GGESGDVQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHEAPQAILTFEE
ANLCQTLSNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHLMR
DGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCIRAVVIYGGTQLGHSIRQI
VQGCNVLCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSK
EQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLV
EILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCP
VLVATSVAARGLDIENVQHVINFDLPSTVDEYVHRIGRTGRCGNTGRAISFFDPESDNHL
AQPLVKVLSDAQQDVPAWLEEIAFSTFVPGFSGSTRGNVFASVDTRKSFQGKSTLNTAGF
SSLQAPNPVDDESWD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagaaatcatcaagcctcacatgtcttcttatgttcct
gtgtttgaaaaggataaatattcttctggagcaaatggagacacttttaacagggcttca
gtttcatcaccggaaatggacaacgggtcttcaagaaaagatcctttcttgagaactgga
tttggctctgggaggagtttgggaaacagagatgctggagagtttagtaaaaaagagact
atacccacaatgggtagttttggaagtggaaaaggttttggaaacagaggtttttcaaat
aataagtttgaagaaggcgacagctctggtttctggaaagagtctaataatgattgtgaa
gataatcaaacatggaacagagggttttccaagagaggcggctttcaagatggaaatgat
tcagaagcttctgggccatccagaagaggtggaagaggtagtttccgaggttgccgtgga
ggatttagtggtattggaagaccaagtggtggtgagtatgaccaagatgagggagcaccg
cgtactagtggtctttttggttctagaagaccagcattaagtggtgcaggtaatggtgac
actttccaaagcagaagtggtagtggcagtggcagtggcagtggacgaggtggttataaa
ggtttaaatgaagaagtagtaacaggcactggaaagaattcttggaagtcagaagctgaa
ggaggagaaagtggtgatgttcaaggaccaaaagtgacctacataccccctcctccacca
gaagatgaagattccatctttgcacattatcagactggcataaactttgacaagtatgac
actattcttgtagaagtatctggacatgaggcaccacaagcaattctgacttttgaagaa
gctaatctttgtcaaacactgagtaacaacattgccaaagctggctatactaagcttaca
cctgtgcaaaaatacagtattcctattatattagctggacgagatttgatggcttgtgct
cagacagggtctgggaagactgcggcttttctcttacctattttggctcacctgatgcgt
gatggaataactgcaagtcgttttaaagagcttcaggaaccagagtgtattattgtagca
ccaactcgagaattgatcaaccagatatatttggaagccagaaaattttcttttgggact
tgcatcagagcagttgttatatatgggggaacccagttggggcattcaattcgacagata
gtacaaggctgtaatgtattatgtgccacacctgggagactgatggatatcataggtaaa
gaaaagattggactcaaacaagtcaagtatttagttttggatgaggcagatcgcatgttg
gatatgggctttggaccagaaatgaagaaactaatttcttgcccaggaatgccatccaaa
gaacaacgacaaactcttttgtttagtgctacttttccagaagaaattcagaggttggct
ggagagtttttgaagtccaattatttgtttgttgctgttggacaagtaggtggagcgtgt
agagatgttcagcaaagtattctccaagttggccagtactcaaaaagagaaaaacttgtt
gaaattctacgaaacataggtgatgaaagaactatggtctttgttgaaactaagaaaaaa
gcggattttattgcaacctttctttgtcaagaaaaaatatcaactacaagcattcatggt
gatcgagaacaaagagagagagaacaagctcttggagattttcgctgtggaaagtgtcca
gttcttgttgctacttcggtagctgccagaggattggatattgaaaatgttcagcatgtt
atcaattttgatcttccttctaccgtcgatgaatatgttcatcgaattggacgtactggg
cgttgtgggaataccggcagagcaatttctttttttgatcctgaatcagataatcatttg
gcacagccgctagtcaaagtactgtcagatgctcaacaggatgttcctgcatggttggag
gaaattgcctttagtacatttgttcctggcttcagtggtagtacaagaggaaatgtgttt
gcatcagtggatactagaaagagtttccagggcaagagcactttgaatacagccggattt
tcttctttacaagctccgaatccagtagatgatgaatcgtgggattaa
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