Perognathus longimembris pacificus (Pacific pocket mouse): 125367457
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Entry
125367457 CDS
T08928
Symbol
Ocln
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03272
Virion - Hepatitis viruses
plop04382
Cornified envelope formation
plop04514
Cell adhesion molecule (CAM) interaction
plop04530
Tight junction
plop04670
Leukocyte transendothelial migration
plop05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125367457 (Ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125367457 (Ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125367457 (Ocln)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125367457 (Ocln)
09158 Development and regeneration
04382 Cornified envelope formation
125367457 (Ocln)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
125367457 (Ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125367457 (Ocln)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125367457 (Ocln)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
FKBP15
Laminin_II
UPF0182
Cation_ATPase_C
APG6_N
Phage_scaffold
DUF4164
GAS
Swi5
TMF_TATA_bd
DUF7607
FapA
DUF5955
DUF7307
PUMA_CC
DivIC
Motif
Other DBs
NCBI-GeneID:
125367457
NCBI-ProteinID:
XP_048224077
LinkDB
All DBs
Position
19:complement(44048031..44086703)
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AA seq
522 aa
AA seq
DB search
MSTRPFESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVLVMCIAIFACVASTLAWDRGYGSSFLGGSLGYPYGGSGFGSYGNGYNY
GYGYGYGGGYTDPRAAKGFLLAMVAFCFIASLVIFVTSVIRSDMSRTRRYYLTVIIVSAI
LGIMVFIATIVYIMGVNPTAQATGSMYGQQIYALCNQFYGPGGPTLIMDQYLYHYCVVDP
QEAIAIVLGFMIIVAFALIIFFAVKTRRKMDRYDKSNILWDKEHIYDEQAPNVEEWVKNV
SAGTQDPPPPSDYVDRVDSALAYSSNGKANGGKRLYSESSYKSTPLVPEVAQELPLTSPV
DDFRQPRYSSSGNLETPSKRAPTKGRSGTARRAEPDHYETDYTTGGESCDELEEDWVREY
PPITSDQQRQLYKRSFDTGLQEYKSLQAELDEVNKELSRLDKELDDYREESEDYMAAADE
YNRLKQVKRSADYKSKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaggccttttgaaagtccacctccttatagacctgatgaattcaagccaaac
cattatgcaccgagtaatgacatctacggtggagaaatgcacgttcggcccatgctctct
caaccagcgtactcgttttaccccgaagatgagatccttcatttctacaagtggacgtct
cccccaggagtgattcggattctgtctatgctcgttcttgtcatgtgcattgccatattt
gcctgcgtagcctcgacacttgcctgggacaggggctacgggtccagcttccttggtggt
agcttgggctacccctacggaggaagtggctttggaagctatgggaacggctataattac
ggttatggttatggctacggaggaggatatacagatccaagagctgcaaagggcttcctg
ttggccatggttgccttttgtttcattgcctccttggtgatatttgttaccagcgtgata
agatctgatatgtctagaacgagaagatactacctaacggtgataatagtaagtgccatc
ctaggcatcatggtgtttattgcgacaattgtctatataatgggagtcaacccaactgcc
caggccactggatctatgtacggtcaacagatatacgcactctgcaaccagttttatggg
cctggaggccccacactcatcatggatcagtatttgtatcactactgtgtggtggacccc
caggaggccattgctattgtactgggcttcatgattattgtggcttttgctttaatcatt
ttttttgctgtgaaaacacgaagaaagatggaccgttatgacaaatccaatattttgtgg
gacaaggagcacatttatgatgaacaggcccccaatgtggaagagtgggttaaaaacgtc
tctgcaggcacacaagacccgcccccgccgtctgactacgtggaccgagtggacagcgcc
ctggcctactcctccaacggcaaagcgaacgggggcaagcggctgtactcggagtcttcc
tacaagtcaacgccactggtgcctgaagtggctcaggaacttcccctgacgtcacccgtg
gacgatttcaggcagccccgttacagcagcagtggcaacttggagacgccttccaagagg
gcccccaccaagggaagatccggaacggcgaggagagcggagccagaccactacgagacg
gactacacgaccgggggcgagtcctgcgacgagctcgaggaagactgggtcagggaatat
ccacccatcacttcagatcaacaaagacaactctacaagagaagttttgacacgggcctg
caggaatacaagagtttacaagcagaacttgatgaggtcaacaaggaactctctcgtctt
gataaagaattggatgactatagagaagagagtgaagactacatggctgctgctgatgaa
tacaatagattgaagcaagtaaaaagatctgcagattacaaaagtaagagaaactactgc
aaacagctgaagagcaaattgtcccatatcaagaaaatggttggagattatgacagacgg
aaaacatag
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integrated database retrieval system
