Perognathus longimembris pacificus (Pacific pocket mouse): 125367473
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Entry
125367473 CDS
T08928
Symbol
Cdh12
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125367473 (Cdh12)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125367473 (Cdh12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
125367473
NCBI-ProteinID:
XP_048224106
LinkDB
All DBs
Position
19:complement(11636842..11856247)
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AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWILFDGGLLTPLQPQPQQTLPTEARENEIHLSGQQSHFQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDTGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTLVNITLSDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQ
NAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFETKKAYTFKVEASNIHLDHRFH
SAGPFKDTATVKITVLDVAEPPVFSKPVYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKTDGDSYFAVDGTEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNILINVL
DVNEFPPEISVPYETAVCENAKPGQIIQIVSAADRDLSPAGQQFSFRLSPEAAIKPNFTV
RDFRNNTAGIEARRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIVILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVFHY
DDEGGGEEDTQAFDIGALRNPKVVEENKIRRDIKPESLCLPRQRPPVEDNTDIRDFISQR
LQEHDMDPAAPPYDSLATYAYEGNGSIAESLSSIDSVTTETDQDFDYLTDWGPRFKVLAD
MFGEEESYNPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgtttatccctgcttctctggattctatttgatggtggtctccta
acaccacttcaaccacagccacaacagactttacccacagaagcaagagaaaatgaaatc
cacctgtcagggcaacagtcacatttccaacgagtcaaacgtggctgggtgtggaatcag
ttctttgtgctggaagaatacatgggctccgaacctcagtacgtgggaaagctccattct
gacttggacacgggagagggcactgttaaatacacgctctcaggagatggtgctggcact
gtctttaccatcgatgagaccacaggggacattcatgctataaggagcctggacagagag
gaaaagcctttctacacacttcgtgctcaggctgtggacatagaaaccaggaagcctttg
gaacctgaatcagaattcatcatcaaagtgcaagacatcaatgacaatgagccaaagttt
ctggatggcccttacattgctagtgttccagaaatgtctcctgtcggtgcctatgttctc
caggtaaaggccacagatgccgatgacccgacctatggaaacagtgccagagtggtttat
agcattcttcagggacagccttacttctccattgatcccaagacaggggtcattcgcaca
gctttgccgaacatggacagagaagtgaaggagcaataccaggtcctcattcaggccaag
gacatgggcggccagcttggaggactggcaggaaccaccctggtcaacatcaccctctcg
gatgtcaacgacaacccacctcgcttccctaaaagcatcttccatctgaaagttcctgag
tcttcacctattggttcagctattggaagaataagagctgtggatcctgattttggacaa
aacgctgaaattgagtacaacattgttccaggagacgggggaaatttgtttgacattgtc
acagatgaggatacacaggaaggcatcatcaaacttaaaaagcctttagattttgaaaca
aagaaggcatacacgtttaaagtagaggcctccaacatccacctggaccacaggttccac
tctgcgggtcctttcaaagacacggccacggtgaagatcactgtcctggatgtggctgag
ccgccggtgttcagcaagcctgtctacaccatggaggtgtacgaggacacgcccgtaggc
accatcatcggtgctgtcaccgcccaagacctggatgtgggcagcagtgccgtgaggtac
tttatagattggaagacggatggggacagctactttgcagtagatgggactgaaggaacc
attgccactaatgaattactggacagagaaagcacagcacagtataatttctccataatt
gcaagtaaagttagcaatccgttattaacaagcaaagtcaacatactcattaatgtccta
gatgtcaacgaattcccaccagaaatttctgtgccatatgaaacagctgtgtgtgaaaat
gctaagccaggacagataattcagatagtcagtgctgcggaccgagatctttctcctgcc
gggcagcaattctcctttagattatctcctgaggctgccatcaaaccaaactttacggtc
cgtgacttcagaaataacacagctggaattgaagccagaagaaatggatacagccgcaga
cagcaagagttgtatttccttcctgttgtaattgaagacagcagctaccctgtccagagc
agtacaaacacaatgactatcagggtttgtagatgtgactccgatggcaccatcctgtct
tgtaatgtggaagcaatttttctacctgtaggacttagcaccggggctttgatcgcaatc
ctcctatgcattgttattctcttagccatagttgtgttgtatgtagcactgcggaggcag
aagaagaaggacaccctcatgacctctaaggaagacatcagagacaacgtcttccattat
gacgatgaaggaggtggggaggaagacacccaggcttttgatattggggctctgagaaat
cccaaagtggttgaagagaacaaaatccgcagggatataaaaccagaatctctctgttta
cctcgtcagagaccacctgtggaagacaacacagacataagggatttcatcagtcaaagg
ctgcaggaacacgacatggacccagctgcacccccatacgattccttggccacctatgcc
tacgaaggcaacgggtcgatagcagagtccctcagctccatagactctgtcactacagag
actgaccaggactttgattatctgacagactggggaccccgctttaaggtcttggcagac
atgtttggtgaagaagagagttataaccctgataaagtcacttaa
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