Perognathus longimembris pacificus (Pacific pocket mouse): 125367492
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Entry
125367492 CDS
T08928
Symbol
Utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125367492 (Utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125367492 (Utp15)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125367492 (Utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SCAP
BBS2_Mid
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_LRRK2
WDR54
Beta-prop_IFT122_2nd
KNTC1_N
Beta-prop_NUP159_NUP214
DUF7324
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125367492
NCBI-ProteinID:
XP_048224133
LinkDB
All DBs
Position
19:complement(42425693..42468932)
Genome browser
AA seq
518 aa
AA seq
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MSSYKPVAIQTYPILGEKITQDTVYWNNYKTPVQIKEFGAVSKVDFSPQAPYNYAVTASS
RIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEG
HTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASRLNPDLF
VTGSYDHTVKMYDARTKESVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQL
LVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHE
DETIVVGMTNGILSVKHRKSETKKESFPRRRRPAYRTFIKGKNYMKQRDDILINRPTKKK
LESYDRDLKNFRVSQALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITR
VLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLILQGLVEKEIDYQREL
LETLGMMDMLFATMTRNESTSMLGHPSVEFLENKEMES
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttataagcctgtagctattcaaacctatcctatacttggtgagaagatcaca
caagatactgtgtactggaacaactataagacccctgttcagataaaggaatttggtgca
gtatcaaaagtagacttttctcctcaggctccatataactatgcagtaacagcttcctca
agaattcacatttatggtcgatactcccaagaacctataaaaaccttttcgcgttttaaa
gacacagcatactgtgctactttccgacaggatggtcagttgcttgtggctggaagtgaa
gatggtgttgttcagctttttgatataagtgggagggccccacttagacagtttgaaggc
cataccaaagcagttcatacagtggattttacagctgacaaataccatgtggtttctgga
gctgatgattatacagttaaattatgggatattccaaactccaaagaaattctgacattc
aaagaacattctgattacgtgaggtgtggatgtgctagcagactgaacccagatcttttt
gtaacagggtcatatgatcatactgtcaagatgtatgatgcacgaacgaaggaaagtgtc
ctctgtgtggagcatgggcagccagtggagagcgtcttgcttttcccttctggaggtctt
ctggtgtcttcaggaggtcgttatgttaaagtctgggacatgttaaaaggaggacagttg
ctggtatctttgaaaaatcatcataaaaccgtgacgtgtctgtgtctgagcagctcgggt
cagaggttactctctggttcactagataggaaggtgaaagtgtacagtacaacttcctac
aaagtagtccacagttttgattatgctgcttcaattttgagtctcgcgcttgcacacgaa
gatgagacaatagtcgtgggaatgaccaatggaatactcagtgttaaacaccggaaatct
gagacaaagaaagaatcttttcctaggaggagaaggcctgcataccgtacctttattaaa
ggaaagaattacatgaagcaacgggatgacattttgatcaacaggccaacaaagaaaaaa
ctagaatcatatgacagagacctgaaaaattttcgggtctctcaggcactggacagagtc
cttgagcctaattgtgtaataaagacgcccgaagtcacagtgtccatcataaaggagcta
aatcgaagaggagtccttgcaaacgccctggcagggcgggatgaaaaggagatcacgcgt
gtgcttaactttttgataaggaatctgtctcaaccaagatttgcccctgttttgattaat
gctgctgagataattattgatatatatctacctgtgattgggcagtcaccagtagttgat
aagaagtttttgatacttcaaggacttgtagaaaaagagattgattaccaaagagagctc
ctagaaaccttggggatgatggacatgctttttgccaccatgacaaggaatgaaagcact
tctatgttgggacatccatctgttgaatttctagaaaacaaggagatggaatcatag
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