Perognathus longimembris pacificus (Pacific pocket mouse): 125367498
Help
Entry
125367498 CDS
T08928
Symbol
Itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04640
Hematopoietic cell lineage
plop04810
Regulation of actin cytoskeleton
plop04820
Cytoskeleton in muscle cells
plop05165
Human papillomavirus infection
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125367498 (Itga1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125367498 (Itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125367498 (Itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125367498 (Itga1)
04810 Regulation of actin cytoskeleton
125367498 (Itga1)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
125367498 (Itga1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125367498 (Itga1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125367498 (Itga1)
05412 Arrhythmogenic right ventricular cardiomyopathy
125367498 (Itga1)
05414 Dilated cardiomyopathy
125367498 (Itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125367498 (Itga1)
04515 Cell adhesion molecules [BR:
plop04515
]
125367498 (Itga1)
04090 CD molecules [BR:
plop04090
]
125367498 (Itga1)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125367498 (Itga1)
Cell adhesion molecules [BR:
plop04515
]
Integrins
Integrin alpha subunits
125367498 (Itga1)
CD molecules [BR:
plop04090
]
Proteins
125367498 (Itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
EIF3I
FG-GAP_2
vWA_SIBA-E
Integrin_alpha
LYRIC
DUF7039
Motif
Other DBs
NCBI-GeneID:
125367498
NCBI-ProteinID:
XP_048224142
LinkDB
All DBs
Position
19:complement(27152459..27292248)
Genome browser
AA seq
1179 aa
AA seq
DB search
MAPTHRASPGVAVACCWLFTVLLGVCKSFNVDVKNSMSFKGSVEDMFGYTVQQYENEEGK
WVLIGSPLVGQPQTRTGDVYKCPVGRGGSLPCVKLDLPVNTSIPNVTDVKENMTFGSTLV
TNPKGGFLACGPLYAYRCGHLHYTTGICSDISPTFQVMNSFAPVQECGTQLDIVIVLDGS
NSIYPWESVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAAKKI
IRRGGLQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDSYDLKKVIQDCEDE
NIQRFSIAILGHYNRGNLSTEKFVAEIKSIASEPTEKHFFNVSDELALVTIVKALGERIF
ALEATADQSAASFEMEMSQTGFSAHYSQDWVMLGAVGAYDWNGTVVMQKANQTIIPENTT
FQVESAKENEPLASYLGYTVNSATVPGDVLYIAGQPRYNHTGQVIIYRMEDADVKILQTL
NGEQIGSYFGSVLTTVDIDKDSNTDILLVGAPMYMGTEKEEQGKVYVYTLNQSRFEYQMS
LEPIKQACCSTLKHNSCTKENTNEPCGARFGTAIAAVKDLNVDGFNDVVIGAPLENDHAG
AVYIYHGSGKTIKKEYAQHIPSGGDGKTLKFFGQSIHGEMDLNGDGLTDVTIGGLGGAAL
FWTRDVAVVKVTMNFEPNKVNIQKKNCHMEGKETVCINATICFNVKLKSKEDSIYKADMQ
YRVTLDSLRQISRSFFSGTQERRIQRNITVQDSECTKHSFYMLDKHDFQDSVRITLDFNL
TDPENGPVLDDSLPNTVHEHIPFAKDCGKKEKCISDLTLAVTTTEKDLLVVRSQSEKFNV
SLTVRNKRDSAYNTRTIVQYSPNLIFSGIEGIQKDSCESNHNLTCKVGYPFLRKGEMVTF
KILFQFNTSYLMENVTIHLSATSDSEEPPESLFDNEVDISIAVKYEVGLQFYSSASEYHI
SISANETIHEVINSTEDIGNEINIFYLIRKRGHFPMPELQLSISFPNLTSDGYPVLYPTG
WSSSDNANCRPQSLEDPLGINSGKKMIVSKSEDLKRGTLLDCSTCKLATITCNLIPSNLS
QVNISLILWKPTFIKAHFSSLNLTIRGELWSKNASLVLSSSNQKRELAIQISKDGVPGRV
PLWVILLSAFAGLLLLLLLILLLWKIGFFKRPLKKKMEK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcccccacgcaccgggccagcccaggggtcgctgtcgcctgctgctggctcttcacg
gttcttctaggtgtctgcaaatccttcaatgttgatgtgaagaattcaatgagtttcaag
ggttcagtggaggacatgtttggatacacagttcaacaatatgaaaatgaagaaggaaaa
tgggtgcttattggttctcctttagttggtcagccccaaaccagaactggagatgtttat
aaatgcccagtggggagaggtggatcattaccttgtgtaaagttggatctaccagtaaat
acatcgattcccaatgtcacagatgtaaaagagaatatgaccttcggatcaactttagtc
accaacccaaagggggggtttctggcatgtgggcctttatatgcctatagatgtggacat
ttgcattacacaactggaatctgctctgacatcagccccacatttcaagtgatgaactcc
tttgcccctgtacaagagtgtggcacccagctggacatagtcatcgtgctggatggttcc
aacagcatctacccctgggaaagtgtcactgcgtttttaaatgaccttcttaaaagaatg
gacattggtcctaaacagacacaggttggaattgtacaatatggagaaaatgtaacccat
gagttcaacctcaataagtattcatctacagaagaagtacttgttgcagcaaagaagatc
atccggagaggtggcctccagactatgacagccctgggaatagacacagccaggaaggag
gcattcactgaagcccgaggtgctcgaaggggagtcaaaaaagtgatggttattgtgact
gatggggaatctcatgactcctatgatctgaaaaaggtcatccaagactgtgaagatgaa
aacattcaaaggttttccatagctattcttggccactataaccgaggaaatttgagcact
gaaaaatttgtggcagaaataaaatcaattgcaagtgaacccaccgaaaaacatttcttc
aatgtctcagatgaattggcccttgtcactattgtcaaagctctgggagaaagaatattt
gccctggaagctacagctgaccagtctgcagcatcatttgaaatggaaatgtctcagacc
ggcttcagtgctcattattcacaggactgggtcatgcttggagcagtaggagcctatgac
tggaatggaacagttgtcatgcagaaggctaatcaaaccataattcctgaaaacacaacc
tttcaggttgagtctgccaaagagaatgaaccccttgcatcctatttaggttacactgtg
aactcagccacagtccctggagatgtgctgtatattgcggggcagcctcggtacaatcat
acaggccaggtcatcatctacaggatggaggatgcagatgtcaagattctccagacactc
aatggagagcagattggctcctactttggtagtgttttaacaacagttgacattgataaa
gattctaatactgacattcttctcgttggtgctccgatgtacatggggacagagaaagaa
gaacaaggaaaagtgtacgtgtacaccttgaaccagtcaaggtttgaatatcagatgagc
ctggaaccaattaaacaggcttgctgctccactctgaaacacaattcatgcacaaaagag
aacacaaatgagccatgcggggctcgctttgggacagctattgctgcagtcaaagacctc
aatgttgacggtttcaatgatgtggtgataggagcccccctggaaaacgatcatgcagga
gctgtgtacatttatcacggcagtggcaagaccataaagaaagagtatgcccagcatatc
ccatcaggtggagatggcaagacactgaaattttttggccagtctattcatggagaaatg
gatttgaatggcgatggtctgactgatgtgactattgggggtcttggtggtgctgccctc
ttctggactcgagatgtggctgtagttaaagtgaccatgaactttgaacctaataaagtg
aatattcaaaagaaaaactgccatatggagggaaaggaaacagtgtgtataaatgctaca
atatgttttaatgtgaaactaaagtctaaagaagactccatttacaaagctgatatgcag
taccgggtcacattagattcactaagacagatatcacgaagttttttctctgggacccaa
gagagaaggatccaaaggaacatcacagtccaagactcagaatgcactaagcactccttc
tacatgttggacaaacatgacttccaggattctgtgaggataactttggattttaatctc
actgacccagaaaatgggcccgttcttgatgattctctaccaaacacagtacatgaacat
attccctttgccaaagactgtggaaagaaggaaaaatgtatttcagacctcaccctggct
gtaactactaccgaaaaggacctgcttgttgtcaggtcgcagagcgagaagttcaacgtt
agcctcactgtcaggaacaaaagggacagtgcctataacaccagaacaattgttcagtat
tctccaaatctcattttttcaggaattgaggggatccaaaaagacagttgtgaatccaat
cataatctcacatgtaaagttggatatccttttctgagaaaaggagaaatggtaactttc
aaaatattatttcaatttaatacatcatatctcatggaaaatgtgaccattcatttaagt
gcaacaagtgacagtgaagagcctcctgaatcactttttgataatgaagtagatatttct
atcgcagtaaaatatgaagttggactacagttttacagctctgcaagtgaataccatatt
tcaatttcggccaatgagacaatccatgaagttatcaattccactgaggatattggaaat
gaaattaatattttctacttgattagaaaaaggggacattttccaatgccagaacttcag
ctgtccatttcattccctaatctgacgtctgatggttatcctgtcctgtatccaactgga
tggtcctcttccgacaatgcaaactgcagaccccagagtcttgaagatcctcttggaatc
aactcaggaaaaaaaatgattgtatcaaaatctgaagatctcaaacgaggcacacttctg
gactgcagtacgtgtaaacttgctaccatcacgtgcaatcttatcccttccaatctgagc
caagtgaacatttcacttatcttgtggaaaccaacttttataaaagcacatttttccagc
ttaaatctgacaatcaggggagaactttggagtaaaaatgcatctctggttttaagtagt
agcaaccaaaaaagagagctggctattcaaatatccaaggatggagtcccgggcagagtg
ccactgtgggttatcctcttgagtgcatttgctgggctattgctgctactgctgctgata
ttacttctatggaaaattggtttcttcaaaaggccactaaagaagaaaatggagaaatga
DBGET
integrated database retrieval system
