Perognathus longimembris pacificus (Pacific pocket mouse): 125367534
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Entry
125367534 CDS
T08928
Symbol
Ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125367534 (Ppwd1)
03110 Chaperones and folding catalysts [BR:
plop03110
]
125367534 (Ppwd1)
Enzymes [BR:
plop01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125367534 (Ppwd1)
Spliceosome [BR:
plop03041
]
Complex C
Other components
PPlases
125367534 (Ppwd1)
Chaperones and folding catalysts [BR:
plop03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125367534 (Ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR19_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Vps41
DUF505
Motif
Other DBs
NCBI-GeneID:
125367534
NCBI-ProteinID:
XP_048224182
LinkDB
All DBs
Position
19:40077304..40098138
Genome browser
AA seq
646 aa
AA seq
DB search
MAAESSSDPQTRRRRRRDAEDPEKPEPSERELAVVVAGAPENDEESEERWVGPLPVEATL
AKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVVCTKTDFIITASHDGHVKFWKKIE
EGIEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVFDVVNFDMINMLKLGYFPGQC
EWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIFDKLHTSPLTQIRLNPVYKAVVS
SDKSGMIEYWTGPPHEYKFPRNVNWEYKTDTDLYEFAKCKAYPTSICFSPDGKKIATIGS
DRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLIN
IVFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIRVMQLALFQGIAKKHRAATTIE
MKASENPVLQNIQADPTIVCTSFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMA
ATQAEGPKRVSDSAIVHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGF
MIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTP
WLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagagcagcagcgatcctcagacgagacggaggaggcgccgggacgccgag
gaccccgagaagccggaaccgagcgagagagagttggccgtggtcgtcgcgggagccccg
gagaatgacgaggagagcgaggagcgctgggtggggcctctacccgtggaggccacactg
gccaagaagaggaaagttcttgagtttgaaagagtctatcttgataatctccccagtgca
tccatgtatgagcgcagttacatgcatagagatgttatcacccatgtggtatgcaccaag
actgattttattatcactgccagtcatgatggtcatgtaaagttctggaaaaaaatagaa
gagggaatcgaatttgttaagcattttcgtagccaccttggagttattgagagtattgca
gttagctctgagggagcgttgttctgttctgtgggtgatgataaagcaatgaaggtcttt
gatgtagtgaactttgacatgatcaatatgctgaagcttggttattttccaggacagtgt
gaatggatctattgcccaggagatgcaatatcttcagttgctgcttctgagaagagtaca
ggaaaaattttcatttatgatggtcgaggagataaccaaccacttcatatatttgacaaa
ctccatacatcacctcttactcagataaggctaaacccagtttacaaagcagtggtatct
tccgacaaatccggaatgattgaatactggactgggcctcctcatgaatataaattccca
agaaatgtgaactgggaatataaaactgacacagatttatatgaatttgccaaatgtaag
gcttatccaaccagcatatgtttttcacctgatgggaagaaaatagctaccattggatct
gatagaaaagttagaattttcaggtttttaactggaaaacttatgagagtctttgatgaa
tcattaagtatgtttactgaactgcaacaaatgaggcaacagctaccagacatggaattt
ggccgacgaatggcagtagagcgtgagttggagaaagtggatgctgtaagattaattaat
atagtttttgatgaaactggacacttcgtgctgtatggaacaatgctgggcattaaagtt
ataaatgtagaaacaaaccggtgtgtgcggatcttaggcaagcaagaaaatattagagtg
atgcaactggctttatttcaaggcatagccaaaaagcatcgcgctgcaactacaatagag
atgaaagcttctgaaaaccctgttcttcagaatattcaagctgaccccacaatagtctgt
acgtctttcaaaaagaatagattttatatgtttaccaaacgagaaccagaagacacaaaa
agtgccgactctgaccgagatgtttttaatgagaaaccttctaaagaagaagtcatggca
gctactcaagctgaaggaccaaaacgagtttcagatagtgccattgtgcatacaagcatg
ggagacattcacatcaaactttttcctgttgagtgccctaagactgtggaaaacttctgt
gttcacagccgaaatggctattataatggacacacatttcatcgtataattaagggcttc
atgattcagacaggagatccaacaggtactggtatgggaggagaaagcatatggggagga
gagtttgaagatgaatttcattcaacattacggcatgacagaccctacaccctcagcatg
gcaaatgctggatcaaatactaatggatcccagtttttcataacagtagtccccacacct
tggctggataataaacacacggtgtttggacgagtaacgaaaggcatggaagttgtacag
aggatctccaacgtcaaagtcaatcctaaaacagataagccttatgaggatgtcagcatc
ataaatatcactgtcaaataa
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