Perognathus longimembris pacificus (Pacific pocket mouse): 125367658
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Entry
125367658 CDS
T08928
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125367658 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125367658 (Nipbl)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
125367658 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
125367658
NCBI-ProteinID:
XP_048224296
LinkDB
All DBs
Position
19:20756896..20921653
Genome browser
AA seq
2804 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDT
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSAMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILPSQ
SMPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKEQNEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDINRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSVATKQPQTCVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPISVLQEDIIGNLKSTPENHPETP
KKKSDPELSKSEVKQNESRLSESKPNENRLVETKSSESKLEIKMETQTEEVKQNENRTTE
SKQNESTIVEPKQNENRLSDTKPNDNKQNSARSETTKSRPETPKQRGECRPETPKQKSDG
RPETPKQKGDGRPETPKQKGEGRPETPKQKNEGRPETPKHRHENRRDSGKPSTEKKPEIS
KHKQDTKSDSPRLKSERAEALKQRPDGRSISESLRRDHDNKQKSDDRGESERHRGDQSRV
RRPETLRSSSRNEHSIKSDGSKTDKLERKHRHESGDSRERLSSGEQKLRPDSPRVKQGDS
NKSRLDKPGFKSPNSKDDKRTEGNRSKIDSNKAHLDNKAEFPSYLLGGRSGALKNFVIPK
IKRDKDGNITQETKKMDIKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDR
EDKSRSSLKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVN
EKPKYAEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHTHEGRRS
SGGGRYRNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFK
RFTASIENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTE
KTVKVLNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTS
PNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQ
RVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTA
VFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQC
VVHLPSSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRP
LFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARL
RKDAVTSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQW
FRDTTLETEKAMKSQKDEESSEGTHHSKEIETTGQIMHRAENRKKFLRSIIKTTPSQFST
LKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVV
AVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDT
GISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPH
NDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVE
HILKYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQND
FMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVT
QNFKFVWACFNRYYGAISKLKTQHQEDPNNTSLLSNKPALLRSLFTVGALCRHFDFDLED
FKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNIL
SDKNSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQ
LYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQ
QLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIR
GNRQHRRAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVS
GSNLLQSFKESMVKDKRKETKSSPNKENESSESEEEVSRPRKSRKRVDSDSDSDSEDDIN
SVMKCLPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAI
NRKTGVHFHPKQTLDFLKSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVS
ASTNARNKAITSLLGGGSPKNNTAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQ
MNESVDVMDVIAICCPKYKDRPQIARVVQKTSSGFSVQWMAGSYSGSWTEAKRRDGRKLV
PWVDTIKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggattgctagtctcaca
gacctcctgaaccagctgcctcttccatctcccttacctgctacaactacaaagagcctt
ctttttaatgcacgaatagcagaagaggtgaactgccttttggcctgtagagatgacact
ttggtttcacagcttgtccatagcctcaaccaggtatcaacagatcacatagagttgaaa
gataaccttggcagtgatgatcctgaaggtgatataccagtcttgttgcaggccatcctt
gcaaggagtcctaatgttttcagggagaaaagcatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattatcagcaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacagaatagcccagtgcctagtccatatgcccca
caaagccctgcaggatacatgccatattcccatccttcaagttacacaacgcatccacaa
atgcagcaagcatcggtatcaagtcccattgttgcaggtggtttgagaaatatacatgat
aataaagtttctggtccgttatctggcaattcagctaatcatcatgctgataatcccaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgacgatggtgat
tcttcagcaatgaggaatgctgcatcttttcccttgaggtcaccacagccagtgtgctcc
cctgctggaagtgatggaactcctaaaggatcaagaccacctttaattctaccatctcag
tctatgccttgttcatcacctcgagatgttccaccagacatattgcttgattctccagaa
agaaaacaaaaaaagcaaaagaaaatgaaattgggcaaggatgaaaaagaacagaatgag
aaagctgcaatgtatgatataattagttctccatccaaggactctactaaacttacgtta
agactttctcgtgtaaggtcttcagacatggaccagcaagaggatatgctttctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccattactccacaggatataaaccgcccactaaatgctgctcagtgtttg
tcgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaagcaaccccagacttgtgtggtacagaatcagcaacaggtatca
caacagggacctatatatgatgaagtggaattggacgcactggctgaaattgagcgaata
gaaagagaatcagctattgaaagggagcgcttttcgaaagaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaatcaaacagtgtaatgatgcgcccatttctgtt
cttcaggaagatattattggaaatcttaagtctacaccggaaaatcatcctgagacacct
aaaaaaaaatctgatcctgagctttcaaagagtgaagtgaaacaaaatgaaagtaggctg
tcagaatccaaaccaaatgaaaaccgactggtggaaacaaaatcaagtgaaagtaagtta
gaaattaaaatggagacccaaacggaagaagttaagcagaatgagaacagaactaccgaa
tccaaacaaaatgagagcaccatagttgagcccaaacagaatgaaaatagactatctgac
acaaaaccaaatgacaacaaacaaaacagtgccaggtcagaaacaacaaaatcaagacct
gaaaccccaaagcaaaggggggaatgccggcctgaaactccaaaacaaaaaagtgatggg
cggcctgagaccccaaaacagaagggggatggacggcctgaaactccaaagcaaaaaggg
gagggacggcctgaaactccaaagcaaaaaaatgaaggccggcctgaaacaccaaaacac
agacatgaaaataggagggattctggaaagccatcaacagagaaaaaacctgaaatttct
aaacataagcaagatactaaatctgattcacctcggttaaaatcagaaagagctgaagcc
ttaaaacagagacctgatgggcgatctatttctgagtcactaagacgtgaccatgataat
aaacaaaaatcagatgacaggggtgagtcagagcgacatcgaggggatcaatctagagtt
cgaagaccagaaacattgagatcttctagtagaaatgaacatagcattaaatctgatggt
tcaaaaactgataaactagaaagaaaacataggcatgaatcaggggactcaagggagaga
ctatcttctggggaacaaaaattaagacctgacagtcctcgtgttaaacaaggagattct
aacaagtcaagactggataaacctggttttaaatcaccaaatagtaaagatgacaaaagg
acagagggtaacaggagtaagatagacagtaataaagcacaccttgacaataaggcagaa
ttcccaagttacttgttggggggcaggtctggtgcattgaaaaattttgtcattccaaaa
atcaagagagataaagatggcaatattactcaggagacaaagaaaatggacataaaaggc
gaacagaaagacaaagtagaaaaaatgggattagttgaagatctaaataaaggagctaag
cctgtagttgttctgcagaaactatctttggatgatgttcagaaacttattaaagataga
gaggataaatcaagaagttctcttaaatctatcaagaataagccatcaaagtcaaataaa
ggtagtatagatcaatcagtgttaaaagaattgccccctgaactcctggcagaaattgaa
tctaccatgccactttgtgaacgtgtgaaaatgaacaaacgcaagcgtagtacagttaat
gaaaagccaaaatatgctgaaatcagttcagatgaagataatgatagtgatgaagctttt
gaatcctctaggaaacgacataaaaaagatgacgataaagcttgggaatatgaagagcgt
gacagaagaagctctggggatcataggagaagtggtcacactcacgaaggaagaaggagt
tcaggtggtggtcgttacagaaaccgaagtccatcagattctgacatggaagactattct
cctcctcccagccttagtgaggttgctagaaaaatgaagaagaaagaaaagcagaagaaa
aggaaagcttatgaaccaaaactaacacctgaagaaatgatggactcttcaacttttaaa
agattcacagcctcaatagagaatattttggataatttggaagatatggattttactgca
tttggtgatgatgatgaaattcctcaggaactgcttctaggaaaacatcagcttaatgaa
cttggcagtgaatctgctaaaattaaagcaatgggtataatggataagctgtccactgaa
aaaactgtgaaagtcctaaatatcttggaaaagaatattcaggatgggtcaaagctttcc
actttgttaaaccataataatgatactgaagaagaagaaagattatggagagatcttatt
atggagagagttacaaaatcagcagatgcctgccttacaactatcaacatcatgacatcc
cctaacatgccaaaagctgtgtacattgaggatgtaattgaaagagttatccaatacact
aaatttcatttgcagaatactctctatcctcaatacgatcctgtttacagattagaccct
catggaggggggttattaagttcaaaggccaagcgggctaagtgttctactcataagcag
agagtaatagtaatgctttataacaaagtctgtgacattgttagcagcttatcagaattg
ctagagatacaacttcttacagatacgacgattcttcaggtttcatcaatgggaataacg
ccattttttgtggaaaatgtcagtgaactacagttgtgtgccattaagttagtcactgca
gtattctcaagatatgaaaaacataggcagttaattttggaagaaatttttacttcactt
gcaagattaccaacaagcaagaggagtttaaggaacttcaggttaaatagtagtgatatg
gatggagaacctatgtatattcagatggttacagcactggttttacaacttattcaatgt
gtagtacatttaccatcatcagaaaaggattctaattcagaagaggattcaaataaaaaa
gttgaccaggatgttgtcattactaactcttatgaaacagctatgcgaacagcccaaaac
ttcctttccatcttccttaaaaaatgtggtagtaagcaaggtgaagaagattacagacca
ctctttgaaaattttgttcaagatcttctttcaacagtcaataagcctgaatggccagct
gctgaactactccttagtttgttagggagactgttggttcatcagttcagtaacaagtca
acagaaatggctttaagagtggcatctcttgattaccttggaactgttgctgctcgactg
aggaaagatgctgttacaagcaaaatggaccaaggatctatagaacgaattttaaaacag
gtttcaggaggagaagatgaaatccaacagttgcaaaaagcattgctagattatttggat
gagaacacagagaccgatccttcactagttttttctcgtaaattttatatagcccagtgg
ttccgtgacacaactttagaaacagaaaaggcaatgaaatcacaaaaagatgaagaatca
tctgaaggaacacatcattcaaaagaaattgagacaactggtcaaattatgcatcgagct
gaaaaccgaaaaaagtttcttagaagcattatcaaaaccacaccttctcagttcagcaca
ttaaagatgaactcagatactgtggactatgaggatgcttgcttgattgttcgatatttg
gcctctatgaggccgtttgcccagagctttgatatttatttgacccagatactacgagtt
cttggtgaaaatgcaattgccgttcgaacaaaagccatgaagtgtttatctgaggttgtt
gctgtagaccccagtattctagcaaggcttgatatgcagcgaggagttcatggacgattg
atggataactccactagtgttcgagaagcagcagtagaattattaggtcgatttgtcctt
tgtcgacctcagttggctgaacagtattatgatatgttgattgaaagaatattggatact
ggaatcagtgtcaggaaaagggtaataaagattctaagggacatctgcattgaacaacca
acgtttccaaaaattacagaaatgtgtgtaaaaatgattcgcagagttaatgatgaagaa
ggcattaagaaattagttaatgaaacattccaaaaactctggtttactccaactccacac
aatgacaaagaagcaatgacaaggaaaattttgaacatcactgatgtggttgcagcatgc
agagatactggatatgactggtttgagcaacttcttcaaaatttgttgaagtccgaagag
gattcctcatataaacctgtgaagaaagcttgtactcaacttgttgataacctagttgag
cacattcttaaatatgaggaatctctagctgactctgacaacaaaggtgtgaattctgga
agattggtagcttgcataaccactttgttcttattcagcaaaataagaccccaactcatg
gttaaacatgccatgactatgcaaccatatcttaccactaaatgtagtacccaaaatgat
ttcatggttatctgcaatgttgcaaaaatcctcgagttagttgtaccactaatggagcat
ccaagtgaaactttccttgccactattgaagaagatctaatgaagcttatcatcaaatat
ggcatgactgtagtacagcattgtgtgagctgtcttggagctgttgtaaataaagtgaca
caaaattttaaatttgtgtgggcctgtttcaatagatattatggtgccatttcaaaatta
aaaactcaacaccaagaggacccaaataacacttcacttctttcaaacaaaccagcactt
cttaggtcactcttcactgttggagcactgtgtcggcattttgattttgatctggaagat
tttaaaggcaatagtaaggttaacataaaggataaagtacttgaactgctgatgtatttt
acaaaacattcagatgaagaagtacagacaaaagccatcattggtcttggatttgctttt
attcagcatccaagtctaatgtttgagcaagaagtgaagaatctgtataataatatttta
tctgataagaactcctcagtaaacttaaaaatacaagtgttaaaaaacctccagacctac
ctacaagaagaggatacacgaatgcagcaggcagatagagactggaaaaaagttgcaaaa
caggaagacttaaaagaaatgggcgatgtttcctcagggatgagtagttccatcatgcag
ctttacctcaaacaggtgcttgaggcgttttttcacacccagtcaagtgtgcgccacttt
gccctaaatgtcattgcattgaccctaaaccagggtcttattcatccagttcagtgtgtc
ccatatttaattgccatgggcacagacccagagccagctatgcggaacaaagctgaccag
cagcttgtggaaatagacaaaaaatatgctggattcattcatatgaaagccgtggctggc
atgaagatgtcataccaggtacaacaagcaatcaacacgtgcctaaaagatcctgtgagg
ggtttcagacaagatgagtcctctagtgctttgtgttcacacctgtactccatgatccgt
gggaaccgtcagcacagacgagcctttctaatttctttactcaacctctttgatgacaca
gcaaaaacagaagtgactatgctcttgtatatagcagacaatctagcctgttttccatac
cagacacaggaagagccgttgtttataatgcatcatatagacattacactctcagtttct
ggtagtaacctactgcagtcattcaaggagtctatggtaaaggacaaaaggaaagagaca
aaatcatctcctaataaggaaaatgagtcaagtgagagtgaagaagaagtttccaggcct
cggaagtcacggaaacgtgtagattcggattctgattctgattcagaagatgatataaat
tcagtaatgaaatgtttaccagaaaattcagctcctttaattgaatttgcaaatgtctcc
cagggtattttattacttcttatgttaaaacaacatttgaagaatctttgtggattttct
gatagcaaaattcagaaatactcaccatctgaatctgcaaaggtgtatgataaagcaatt
aaccgaaaaacaggagttcattttcatcccaaacaaacactggacttcttgaagagtgat
atggctaattccaaaatcactgaagatgtgaagaggagtatagtaaaacaatatctagat
tttaaacttctcatggaacatctagaccctgatgaagaagaagaagaaggagaggtgtcc
gcgagcacgaatgctcggaacaaagcaattacctcgctgcttggaggaggcagcccaaaa
aacaatacagcagcagagacagaagatgatgagagtgatggggaggatagaggcggaggc
acttcagggtcattgagaaggtcaaaacgaaattcagactctacggagttggcagcacag
atgaatgaaagtgttgacgtcatggatgtcatcgctatttgctgtccaaagtacaaagat
cgaccacaaattgcaagagtagtacagaaaaccagcagtggcttcagtgttcagtggatg
gcaggctcctacagtggctcctggactgaggccaagcgccgcgatggccgcaaactggtg
ccttgggtagacactattaaagagtcagacattatttacaaaaaaattgctctaacgagt
gctaataagctgactaataaagttgttcagactttacgatccctgtatgccgccaaggat
gggacttccagctaa
DBGET
integrated database retrieval system
