Perognathus longimembris pacificus (Pacific pocket mouse): 125367666
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Entry
125367666 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-4-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125367666
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125367666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
125367666
NCBI-ProteinID:
XP_048224304
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Position
19:complement(950406..954847)
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AA seq
517 aa
AA seq
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MSYPQFGYPYSSAPQFLMATNSLSACCEPGGRPLAEPGPAAPAQAPVYCPVYESRLLATA
RHELNSAAALGVYGGPYGGAXGYGNYVTYGSEASAFYSLNSFESKDGAGSAHAGLGPAAA
AYYPYEPALSQYPYDRYGTMDSGTRRKNATRETTATLKAWLQEHRKNPYPTKGEKIMLAI
ITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYGEGEEEEEEEEEEAGEEEA
RGEAPKSAKSEEPVGKEDKELELSDLDDFDPLEAXTPECEPKAAFQPLDGSLDRVPATPE
GPGRRGKETSGALRGALASSGXAGRSEDVERARSCLRGVVAGLEPQPGGGPPARGEAQLG
FVPAGAPAGLEAKPRIWSLAQTATALSQTEFPSCMLKRRGPAASSAPPATPPAAPAPAGG
ALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWAAAKGALLDPXPAGRSLGAGAGVLT
TPLARAFPPATPHDTPTASAARELLAVPKAGGEPFCA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagttcgggtacccctactcctcggcgccccagttcctgatggccacc
aactccctgagcgcgtgctgcgagccgggcgggcgcccgctggccgagccggggcccgcc
gcgccggcccaggcccccgtctactgccccgtctacgagagccggctgctggccacggcg
cgccacgagctcaactcggctgccgcgctcggcgtctacggcggcccctacggcggcgcg
ncaggctacggcaactacgtgacctacggctccgaggcgtccgccttctactcgctgaac
agcttcgagtccaaggacggagccgggtccgcgcatgcgggccttgggccagcggccgcg
gcctactatccctacgagcctgctttgagccagtacccgtatgacaggtatgggaccatg
gacagcggcacgcggcgcaagaacgccacgcgggagaccacggccacgctcaaggcctgg
ctgcaggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggccatc
atcaccaagatgaccctcacgcaggtctccacctggttcgccaacgcccgccggcgcctc
aagaaggagaacaagatgacgtggccgccgcggaacaagtgtgccgacgagaagcggccc
tacggggagggcgaggaggaggaggaggaggaggaggaggaggccggcgaggaggaggct
cgaggggaggccccgaagagcgccaagagcgaagaacccgtgggaaaagaagacaaggaa
ctagagctcagtgacctggatgacttcgaccccctggaggcangcaccccggagtgtgag
ccgaaggccgctttccagcccctggacggcagcctggaccgcgtccctgccacccccgaa
ggccctggccgccggggcaaggagacttcgggggcactccgcggggccctggcctccagc
ggcncggccggccggagcgaggacgtggagagagcgcggagctgcctccgcggcgtggtg
gcggggctggagccgcagcccgggggaggcccgccggcccgcggcgaggcccagctgggc
ttcgtacccgccggggcgccagccggcttggaggccaagcctcgcatctggtctttggcc
cagacggccacggctctgagccagactgaatttccctcgtgcatgctcaagcgtcgaggg
cccgccgcgtcctcggcgccccccgccacgccccccgcggccccggccccggccgggggg
gccctggacaggcaccaggactccccagtaaccagtctcagaaactgggtagacggggtg
ttccacgaccccattctcaggcacagcactttgaaccaggcctgggccgcggccaagggg
gcccttttggatccgnggccggcggggcgctcgctgggggcgggggccggcgtgctgacc
acgcccctggccagggccttcccgcccgccacgccgcacgacaccccgactgccagcgca
gcccgggagctgctggcggtgcccaaagccgggggcgagcccttctgcgcctga
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